chr1	CG	SV	170689001	170689478	59	+	.	ID=3806;Type=complex;Left=chr1:170689001-170689478+;Right=chr5:76361090-76361516+;Distance=;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=LOR1a:LTR:ERV1;LeftGenes=NM_139240:+;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	76361090	76361516	59	+	.	ID=3806;Type=complex;Left=chr1:170689001-170689478+;Right=chr5:76361090-76361516+;Distance=;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=LOR1a:LTR:ERV1;LeftGenes=NM_139240:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	170688614	170689014	48	-	.	ID=1838;Type=complex;Left=chr1:170688614-170689014-;Right=chr5:76360573-76361075-;Distance=;DiscordantMatePairAlignments=48;LeftRepeat=;RightRepeat=LOR1a:LTR:ERV1;LeftGenes=NM_139240:+;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	76360573	76361075	48	-	.	ID=1838;Type=complex;Left=chr1:170688614-170689014-;Right=chr5:76360573-76361075-;Distance=;DiscordantMatePairAlignments=48;LeftRepeat=;RightRepeat=LOR1a:LTR:ERV1;LeftGenes=NM_139240:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	206201312	206201845	16	+	.	ID=3884;Type=interchromosomal;Left=chr1:206201312-206201845+;Right=chr2:65837776-65837931+;Distance=;DiscordantMatePairAlignments=16;LeftRepeat=MLT1D:LTR:MaLR;RightRepeat=MLT1E-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	65837776	65837931	16	+	.	ID=3884;Type=interchromosomal;Left=chr1:206201312-206201845+;Right=chr2:65837776-65837931+;Distance=;DiscordantMatePairAlignments=16;LeftRepeat=MLT1D:LTR:MaLR;RightRepeat=MLT1E-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	132747163	132747568	201	+	.	ID=4461;Type=interchromosomal;Left=chr2:132747163-132747568+;Right=chr16:33862760-33863532-;Distance=;DiscordantMatePairAlignments=201;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	33862760	33863532	201	+	.	ID=4461;Type=interchromosomal;Left=chr2:132747163-132747568+;Right=chr16:33862760-33863532-;Distance=;DiscordantMatePairAlignments=201;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	141488007	141492203	28	.	.	ID=4607;Type=probable-inversion;Left=chr2:141488007-141488448+;Right=chr2:141491725-141492203-;Distance=4196;DiscordantMatePairAlignments=28;LeftRepeat=;RightRepeat=;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00
chr2	CG	SV	141488007	141488448	28	+	.	ID=4607;Type=probable-inversion;Left=chr2:141488007-141488448;Right=chr2:141491725-141492203
chr2	CG	SV	141491725	141492203	28	+	.	ID=4607;Type=probable-inversion;Left=chr2:141488007-141488448;Right=chr2:141491725-141492203
chr2	CG	SV	141907997	142006727	15	.	.	ID=3698;Type=deletion;Left=chr2:141907997-141908513+;Right=chr2:142006335-142006727+;Distance=98338;DiscordantMatePairAlignments=15;LeftRepeat=L1M4b:LINE:L1;Self chain;Tandem period 329;RightRepeat=;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00
chr2	CG	SV	141907997	141908513	15	+	.	ID=3698;Type=deletion;Left=chr2:141907997-141908513;Right=chr2:142006335-142006727
chr2	CG	SV	142006335	142006727	15	+	.	ID=3698;Type=deletion;Left=chr2:141907997-141908513;Right=chr2:142006335-142006727
chr2	CG	SV	141988451	141989086	35	-	.	ID=1604;Type=interchromosomal;Left=chr2:141988451-141989086-;Right=chr5:130351091-130351454-;Distance=;DiscordantMatePairAlignments=35;LeftRepeat=AluSp:SINE:Alu;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=NM_018557:-;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	130351091	130351454	35	-	.	ID=1604;Type=interchromosomal;Left=chr2:141988451-141989086-;Right=chr5:130351091-130351454-;Distance=;DiscordantMatePairAlignments=35;LeftRepeat=AluSp:SINE:Alu;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=NM_018557:-;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	211938534	211974554	44	.	.	ID=3667;Type=deletion;Left=chr2:211938534-211938950+;Right=chr2:211974154-211974554+;Distance=35620;DiscordantMatePairAlignments=44;LeftRepeat=LTR49:LTR:ERV1;RightRepeat=;LeftGenes=;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00
chr2	CG	SV	211938534	211938950	44	+	.	ID=3667;Type=deletion;Left=chr2:211938534-211938950;Right=chr2:211974154-211974554
chr2	CG	SV	211974154	211974554	44	+	.	ID=3667;Type=deletion;Left=chr2:211938534-211938950;Right=chr2:211974154-211974554
chr2	CG	SV	212066574	212102851	19	.	.	ID=4603;Type=probable-inversion;Left=chr2:212066574-212067116+;Right=chr2:212102435-212102851-;Distance=36277;DiscordantMatePairAlignments=19;LeftRepeat=;RightRepeat=L1MA3:LINE:L1;LeftGenes=NM_001042599:-;NM_005235:-;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00
chr2	CG	SV	212066574	212067116	19	+	.	ID=4603;Type=probable-inversion;Left=chr2:212066574-212067116;Right=chr2:212102435-212102851
chr2	CG	SV	212102435	212102851	19	+	.	ID=4603;Type=probable-inversion;Left=chr2:212066574-212067116;Right=chr2:212102435-212102851
chr2	CG	SV	212083874	212162690	40	.	.	ID=1028;Type=probable-inversion;Left=chr2:212083874-212084374-;Right=chr2:212162331-212162690+;Distance=77957;DiscordantMatePairAlignments=40;LeftRepeat=;RightRepeat=;LeftGenes=NM_001042599:-;NM_005235:-;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00
chr2	CG	SV	212083874	212084374	40	-	.	ID=1028;Type=probable-inversion;Left=chr2:212083874-212084374;Right=chr2:212162331-212162690
chr2	CG	SV	212162331	212162690	40	-	.	ID=1028;Type=probable-inversion;Left=chr2:212083874-212084374;Right=chr2:212162331-212162690
chr3	CG	SV	21108697	21483344	77	.	.	ID=3639;Type=deletion;Left=chr3:21108697-21109151+;Right=chr3:21482864-21483344+;Distance=374167;DiscordantMatePairAlignments=77;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_024697:-;XRef=;Frequency=0.00
chr3	CG	SV	21108697	21109151	77	+	.	ID=3639;Type=deletion;Left=chr3:21108697-21109151;Right=chr3:21482864-21483344
chr3	CG	SV	21482864	21483344	77	+	.	ID=3639;Type=deletion;Left=chr3:21108697-21109151;Right=chr3:21482864-21483344
chr3	CG	SV	21491018	21491487	95	+	.	ID=3202;Type=interchromosomal;Left=chr3:21491018-21491487+;Right=chr19:48981115-48981604+;Distance=;DiscordantMatePairAlignments=95;LeftRepeat=;RightRepeat=MSR1:Satellite:Satellite;Self chain;Tandem period 36;LeftGenes=NM_024697:-;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	48981115	48981604	95	+	.	ID=3202;Type=interchromosomal;Left=chr3:21491018-21491487+;Right=chr19:48981115-48981604+;Distance=;DiscordantMatePairAlignments=95;LeftRepeat=;RightRepeat=MSR1:Satellite:Satellite;Self chain;Tandem period 36;LeftGenes=NM_024697:-;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	23514835	25356513	96	.	.	ID=1650;Type=tandem-duplication;Left=chr3:23514835-23515499-;Right=chr3:25356103-25356513-;Distance=1841014;DiscordantMatePairAlignments=96;LeftRepeat=;RightRepeat=;LeftGenes=NM_152653:+;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	23514835	23515499	96	-	.	ID=1650;Type=tandem-duplication;Left=chr3:23514835-23515499;Right=chr3:25356103-25356513
chr3	CG	SV	25356103	25356513	96	-	.	ID=1650;Type=tandem-duplication;Left=chr3:23514835-23515499;Right=chr3:25356103-25356513
chr3	CG	SV	60818746	62727301	99	.	.	ID=1643;Type=tandem-duplication;Left=chr3:60818746-60819237-;Right=chr3:62726906-62727301-;Distance=1908064;DiscordantMatePairAlignments=99;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_003716:-;NM_183393:-;NM_183394:-;XRef=;Frequency=0.00
chr3	CG	SV	60818746	60819237	99	-	.	ID=1643;Type=tandem-duplication;Left=chr3:60818746-60819237;Right=chr3:62726906-62727301
chr3	CG	SV	62726906	62727301	99	-	.	ID=1643;Type=tandem-duplication;Left=chr3:60818746-60819237;Right=chr3:62726906-62727301
chr3	CG	SV	117943518	118222930	100	.	.	ID=3585;Type=deletion;Left=chr3:117943518-117944003+;Right=chr3:118222432-118222930+;Distance=278914;DiscordantMatePairAlignments=100;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	117943518	117944003	100	+	.	ID=3585;Type=deletion;Left=chr3:117943518-117944003;Right=chr3:118222432-118222930
chr3	CG	SV	118222432	118222930	100	+	.	ID=3585;Type=deletion;Left=chr3:117943518-117944003;Right=chr3:118222432-118222930
chr3	CG	SV	118202899	118357885	51	.	.	ID=3584;Type=deletion;Left=chr3:118202899-118203476+;Right=chr3:118357450-118357885+;Distance=154551;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=MIR3:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	118202899	118203476	51	+	.	ID=3584;Type=deletion;Left=chr3:118202899-118203476;Right=chr3:118357450-118357885
chr3	CG	SV	118357450	118357885	51	+	.	ID=3584;Type=deletion;Left=chr3:118202899-118203476;Right=chr3:118357450-118357885
chr3	CG	SV	132067158	132068806	21	.	.	ID=3575;Type=deletion;Left=chr3:132067158-132067520+;Right=chr3:132068442-132068806+;Distance=1284;DiscordantMatePairAlignments=21;LeftRepeat=Self chain;THE1A:LTR:MaLR;RightRepeat=Tigger1:DNA:MER2_type;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	132067158	132067520	21	+	.	ID=3575;Type=deletion;Left=chr3:132067158-132067520;Right=chr3:132068442-132068806
chr3	CG	SV	132068442	132068806	21	+	.	ID=3575;Type=deletion;Left=chr3:132067158-132067520;Right=chr3:132068442-132068806
chr3	CG	SV	137822765	137823177	13	+	.	ID=4354;Type=interchromosomal;Left=chr3:137822765-137823177+;Right=chr16:594283-594697-;Distance=;DiscordantMatePairAlignments=13;LeftRepeat=;RightRepeat=L1ME2:LINE:L1;Self chain;LeftGenes=NM_005862:-;RightGenes=NM_021168:+;XRef=;Frequency=0.00
chr16	CG	SV	594283	594697	13	+	.	ID=4354;Type=interchromosomal;Left=chr3:137822765-137823177+;Right=chr16:594283-594697-;Distance=;DiscordantMatePairAlignments=13;LeftRepeat=;RightRepeat=L1ME2:LINE:L1;Self chain;LeftGenes=NM_005862:-;RightGenes=NM_021168:+;XRef=;Frequency=0.00
chr3	CG	SV	174289321	174645894	19	.	.	ID=1636;Type=tandem-duplication;Left=chr3:174289321-174289849-;Right=chr3:174645777-174645894-;Distance=356045;DiscordantMatePairAlignments=19;LeftRepeat=;RightRepeat=Tandem period 16;LeftGenes=NM_031955:-;RightGenes=NM_014932:+;XRef=;Frequency=0.00
chr3	CG	SV	174289321	174289849	19	-	.	ID=1636;Type=tandem-duplication;Left=chr3:174289321-174289849;Right=chr3:174645777-174645894
chr3	CG	SV	174645777	174645894	19	-	.	ID=1636;Type=tandem-duplication;Left=chr3:174289321-174289849;Right=chr3:174645777-174645894
chr3	CG	SV	174377004	174379027	34	.	.	ID=3553;Type=deletion;Left=chr3:174377004-174377374+;Right=chr3:174378585-174379027+;Distance=1581;DiscordantMatePairAlignments=34;LeftRepeat=MLT1F2:LTR:MaLR;RightRepeat=Kanga1:DNA:Tc2;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	174377004	174377374	34	+	.	ID=3553;Type=deletion;Left=chr3:174377004-174377374;Right=chr3:174378585-174379027
chr3	CG	SV	174378585	174379027	34	+	.	ID=3553;Type=deletion;Left=chr3:174377004-174377374;Right=chr3:174378585-174379027
chr4	CG	SV	11174213	11175148	23	.	.	ID=1629;Type=tandem-duplication;Left=chr4:11174213-11174549-;Right=chr4:11174737-11175148-;Distance=599;DiscordantMatePairAlignments=23;LeftRepeat=L1MA7:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	11174213	11174549	23	-	.	ID=1629;Type=tandem-duplication;Left=chr4:11174213-11174549;Right=chr4:11174737-11175148
chr4	CG	SV	11174737	11175148	23	-	.	ID=1629;Type=tandem-duplication;Left=chr4:11174213-11174549;Right=chr4:11174737-11175148
chr4	CG	SV	62427955	62479079	30	.	.	ID=3515;Type=deletion;Left=chr4:62427955-62428428+;Right=chr4:62478659-62479079+;Distance=50704;DiscordantMatePairAlignments=30;LeftRepeat=;RightRepeat=;LeftGenes=NM_015236:+;RightGenes=NM_015236:+;XRef=;Frequency=0.00
chr4	CG	SV	62427955	62428428	30	+	.	ID=3515;Type=deletion;Left=chr4:62427955-62428428;Right=chr4:62478659-62479079
chr4	CG	SV	62478659	62479079	30	+	.	ID=3515;Type=deletion;Left=chr4:62427955-62428428;Right=chr4:62478659-62479079
chr4	CG	SV	142156420	142157824	65	.	.	ID=1021;Type=probable-inversion;Left=chr4:142156420-142156670-;Right=chr4:142157368-142157824+;Distance=698;DiscordantMatePairAlignments=65;LeftRepeat=;RightRepeat=;LeftGenes=NM_020724:-;RightGenes=NM_020724:-;XRef=;Frequency=0.00
chr4	CG	SV	142156420	142156670	65	-	.	ID=1021;Type=probable-inversion;Left=chr4:142156420-142156670;Right=chr4:142157368-142157824
chr4	CG	SV	142157368	142157824	65	-	.	ID=1021;Type=probable-inversion;Left=chr4:142156420-142156670;Right=chr4:142157368-142157824
chr4	CG	SV	190847757	190848132	22	+	.	ID=3384;Type=interchromosomal;Left=chr4:190847757-190848132+;Right=chr7:92057620-92058046+;Distance=;DiscordantMatePairAlignments=22;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_001040057:-;NM_152789:-;XRef=;Frequency=0.00
chr7	CG	SV	92057620	92058046	22	+	.	ID=3384;Type=interchromosomal;Left=chr4:190847757-190848132+;Right=chr7:92057620-92058046+;Distance=;DiscordantMatePairAlignments=22;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_001040057:-;NM_152789:-;XRef=;Frequency=0.00
chr5	CG	SV	66448761	67597981	28	.	.	ID=1605;Type=tandem-duplication;Left=chr5:66448761-66448938-;Right=chr5:67597529-67597981-;Distance=1149043;DiscordantMatePairAlignments=28;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_001164664:+;NM_015183:+;RightGenes=NM_181523:+;XRef=;Frequency=0.00
chr5	CG	SV	66448761	66448938	28	-	.	ID=1605;Type=tandem-duplication;Left=chr5:66448761-66448938;Right=chr5:67597529-67597981
chr5	CG	SV	67597529	67597981	28	-	.	ID=1605;Type=tandem-duplication;Left=chr5:66448761-66448938;Right=chr5:67597529-67597981
chr5	CG	SV	145747094	145764026	11	.	.	ID=3159;Type=deletion;Left=chr5:145747094-145747547+;Right=chr5:145763459-145764026+;Distance=16365;DiscordantMatePairAlignments=11;LeftRepeat=L2:LINE:L2;RightRepeat=AluJo:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	145747094	145747547	11	+	.	ID=3159;Type=deletion;Left=chr5:145747094-145747547;Right=chr5:145763459-145764026
chr5	CG	SV	145763459	145764026	11	+	.	ID=3159;Type=deletion;Left=chr5:145747094-145747547;Right=chr5:145763459-145764026
chr6	CG	SV	78954324	83827559	29	.	.	ID=887;Type=probable-inversion;Left=chr6:78954324-78954861-;Right=chr6:83827142-83827559+;Distance=4872281;DiscordantMatePairAlignments=29;LeftRepeat=MSTA:LTR:MaLR;RightRepeat=L1MC4:LINE:L1;LeftGenes=;RightGenes=NM_198920:-;XRef=;Frequency=0.00
chr6	CG	SV	78954324	78954861	29	-	.	ID=887;Type=probable-inversion;Left=chr6:78954324-78954861;Right=chr6:83827142-83827559
chr6	CG	SV	83827142	83827559	29	-	.	ID=887;Type=probable-inversion;Left=chr6:78954324-78954861;Right=chr6:83827142-83827559
chr6	CG	SV	79954429	83600848	88	.	.	ID=3089;Type=deletion;Left=chr6:79954429-79954872+;Right=chr6:83600480-83600848+;Distance=3646051;DiscordantMatePairAlignments=88;LeftRepeat=MER20B:DNA:MER1_type;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	79954429	79954872	88	+	.	ID=3089;Type=deletion;Left=chr6:79954429-79954872;Right=chr6:83600480-83600848
chr6	CG	SV	83600480	83600848	88	+	.	ID=3089;Type=deletion;Left=chr6:79954429-79954872;Right=chr6:83600480-83600848
chr6	CG	SV	82671171	83350152	75	.	.	ID=888;Type=probable-inversion;Left=chr6:82671171-82671676-;Right=chr6:83349703-83350152+;Distance=678027;DiscordantMatePairAlignments=75;LeftRepeat=;RightRepeat=AluJo:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	82671171	82671676	75	-	.	ID=888;Type=probable-inversion;Left=chr6:82671171-82671676;Right=chr6:83349703-83350152
chr6	CG	SV	83349703	83350152	75	-	.	ID=888;Type=probable-inversion;Left=chr6:82671171-82671676;Right=chr6:83349703-83350152
chr6	CG	SV	88498298	88498712	31	+	.	ID=4252;Type=interchromosomal;Left=chr6:88498298-88498712+;Right=chr13:33190336-33190725-;Distance=;DiscordantMatePairAlignments=31;LeftRepeat=;RightRepeat=MLT1E2:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	33190336	33190725	31	+	.	ID=4252;Type=interchromosomal;Left=chr6:88498298-88498712+;Right=chr13:33190336-33190725-;Distance=;DiscordantMatePairAlignments=31;LeftRepeat=;RightRepeat=MLT1E2:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	142530339	142534502	33	.	.	ID=3048;Type=deletion;Left=chr6:142530339-142530627+;Right=chr6:142534005-142534502+;Distance=3666;DiscordantMatePairAlignments=33;LeftRepeat=Self chain;RightRepeat=AluSq:SINE:Alu;LeftGenes=NM_016485:+;RightGenes=NM_016485:+;XRef=;Frequency=0.00
chr6	CG	SV	142530339	142530627	33	+	.	ID=3048;Type=deletion;Left=chr6:142530339-142530627;Right=chr6:142534005-142534502
chr6	CG	SV	142534005	142534502	33	+	.	ID=3048;Type=deletion;Left=chr6:142530339-142530627;Right=chr6:142534005-142534502
chr7	CG	SV	899343	900121	72	+	.	ID=4264;Type=interchromosomal;Left=chr7:899343-900121+;Right=chr8:49927450-49927922-;Distance=;DiscordantMatePairAlignments=72;LeftRepeat=(TG)n:Simple_repeat:Simple_repeat;(TGG)n:Simple_repeat:Simple_repeat;Self chain;Tandem period 35;Tandem period 67;RightRepeat=;LeftGenes=NM_015949:+;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	49927450	49927922	72	+	.	ID=4264;Type=interchromosomal;Left=chr7:899343-900121+;Right=chr8:49927450-49927922-;Distance=;DiscordantMatePairAlignments=72;LeftRepeat=(TG)n:Simple_repeat:Simple_repeat;(TGG)n:Simple_repeat:Simple_repeat;Self chain;Tandem period 35;Tandem period 67;RightRepeat=;LeftGenes=NM_015949:+;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	42090594	44892832	10	.	.	ID=1541;Type=tandem-duplication;Left=chr7:42090594-42090944-;Right=chr7:44892393-44892832-;Distance=2801888;DiscordantMatePairAlignments=10;LeftRepeat=;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_000168:-;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	42090594	42090944	10	-	.	ID=1541;Type=tandem-duplication;Left=chr7:42090594-42090944;Right=chr7:44892393-44892832
chr7	CG	SV	44892393	44892832	10	-	.	ID=1541;Type=tandem-duplication;Left=chr7:42090594-42090944;Right=chr7:44892393-44892832
chr7	CG	SV	68757558	68758108	142	+	.	ID=2293;Type=interchromosomal;Left=chr7:68757558-68758108+;Right=chr19:879591-880076+;Distance=;DiscordantMatePairAlignments=142;LeftRepeat=MIR:SINE:MIR;Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_001127231:+;NM_001127232:+;NM_015570:+;RightGenes=NM_005224:+;XRef=;Frequency=0.00
chr19	CG	SV	879591	880076	142	+	.	ID=2293;Type=interchromosomal;Left=chr7:68757558-68758108+;Right=chr19:879591-880076+;Distance=;DiscordantMatePairAlignments=142;LeftRepeat=MIR:SINE:MIR;Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_001127231:+;NM_001127232:+;NM_015570:+;RightGenes=NM_005224:+;XRef=;Frequency=0.00
chr7	CG	SV	110628806	110689348	35	.	.	ID=2974;Type=deletion;Left=chr7:110628806-110629216+;Right=chr7:110688976-110689348+;Distance=60170;DiscordantMatePairAlignments=35;LeftRepeat=AluJb:SINE:Alu;RightRepeat=;LeftGenes=NM_032549:-;RightGenes=NM_032549:-;XRef=;Frequency=0.00
chr7	CG	SV	110628806	110629216	35	+	.	ID=2974;Type=deletion;Left=chr7:110628806-110629216;Right=chr7:110688976-110689348
chr7	CG	SV	110688976	110689348	35	+	.	ID=2974;Type=deletion;Left=chr7:110628806-110629216;Right=chr7:110688976-110689348
chr8	CG	SV	8764151	8766550	54	.	.	ID=2915;Type=deletion;Left=chr8:8764151-8764587+;Right=chr8:8766092-8766550+;Distance=1941;DiscordantMatePairAlignments=54;LeftRepeat=Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_004225:-;RightGenes=NM_004225:-;XRef=;Frequency=0.00
chr8	CG	SV	8764151	8764587	54	+	.	ID=2915;Type=deletion;Left=chr8:8764151-8764587;Right=chr8:8766092-8766550
chr8	CG	SV	8766092	8766550	54	+	.	ID=2915;Type=deletion;Left=chr8:8764151-8764587;Right=chr8:8766092-8766550
chr8	CG	SV	112332555	112333058	48	+	.	ID=2222;Type=complex;Left=chr8:112332555-112333058+;Right=chrX:123453760-123454411+;Distance=;DiscordantMatePairAlignments=48;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001163278:-;NM_001163279:-;NM_014253:-;XRef=;Frequency=0.00
chrX	CG	SV	123453760	123454411	48	+	.	ID=2222;Type=complex;Left=chr8:112332555-112333058+;Right=chrX:123453760-123454411+;Distance=;DiscordantMatePairAlignments=48;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001163278:-;NM_001163279:-;NM_014253:-;XRef=;Frequency=0.00
chr8	CG	SV	112332082	112332567	46	-	.	ID=1117;Type=complex;Left=chr8:112332082-112332567-;Right=chrX:123453300-123453735-;Distance=;DiscordantMatePairAlignments=46;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001163278:-;NM_001163279:-;NM_014253:-;XRef=;Frequency=0.00
chrX	CG	SV	123453300	123453735	46	-	.	ID=1117;Type=complex;Left=chr8:112332082-112332567-;Right=chrX:123453300-123453735-;Distance=;DiscordantMatePairAlignments=46;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001163278:-;NM_001163279:-;NM_014253:-;XRef=;Frequency=0.00
chr9	CG	SV	8060272	8061498	21	.	.	ID=2835;Type=deletion;Left=chr9:8060272-8060585+;Right=chr9:8061089-8061498+;Distance=817;DiscordantMatePairAlignments=21;LeftRepeat=L1PA16:LINE:L1;RightRepeat=L1PA16:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	8060272	8060585	21	+	.	ID=2835;Type=deletion;Left=chr9:8060272-8060585;Right=chr9:8061089-8061498
chr9	CG	SV	8061089	8061498	21	+	.	ID=2835;Type=deletion;Left=chr9:8060272-8060585;Right=chr9:8061089-8061498
chr9	CG	SV	33613781	33614218	14	-	.	ID=771;Type=interchromosomal;Left=chr9:33613781-33614218-;Right=chr16:19502018-19502341+;Distance=;DiscordantMatePairAlignments=14;LeftRepeat=SegDup;Self chain;RightRepeat=L1MB8:LINE:L1;Self chain;LeftGenes=;RightGenes=NM_020314:+;XRef=;Frequency=0.00
chr16	CG	SV	19502018	19502341	14	-	.	ID=771;Type=interchromosomal;Left=chr9:33613781-33614218-;Right=chr16:19502018-19502341+;Distance=;DiscordantMatePairAlignments=14;LeftRepeat=SegDup;Self chain;RightRepeat=L1MB8:LINE:L1;Self chain;LeftGenes=;RightGenes=NM_020314:+;XRef=;Frequency=0.00
chr9	CG	SV	66195161	67904254	12	.	.	ID=823;Type=probable-inversion;Left=chr9:66195161-66195511-;Right=chr9:67903916-67904254+;Distance=1708405;DiscordantMatePairAlignments=12;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	66195161	66195511	12	-	.	ID=823;Type=probable-inversion;Left=chr9:66195161-66195511;Right=chr9:67903916-67904254
chr9	CG	SV	67903916	67904254	12	-	.	ID=823;Type=probable-inversion;Left=chr9:66195161-66195511;Right=chr9:67903916-67904254
chr9	CG	SV	86729628	89227007	134	.	.	ID=1491;Type=tandem-duplication;Left=chr9:86729628-86730225-;Right=chr9:89226552-89227007-;Distance=2496782;DiscordantMatePairAlignments=134;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_001018064:+;NM_006180:+;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	86729628	86730225	134	-	.	ID=1491;Type=tandem-duplication;Left=chr9:86729628-86730225;Right=chr9:89226552-89227007
chr9	CG	SV	89226552	89227007	134	-	.	ID=1491;Type=tandem-duplication;Left=chr9:86729628-86730225;Right=chr9:89226552-89227007
chr9	CG	SV	125033468	125197388	112	.	.	ID=1487;Type=tandem-duplication;Left=chr9:125033468-125033976-;Right=chr9:125196755-125197388-;Distance=163412;DiscordantMatePairAlignments=112;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_018387:-;RightGenes=NM_020946:-;XRef=;Frequency=0.00
chr9	CG	SV	125033468	125033976	112	-	.	ID=1487;Type=tandem-duplication;Left=chr9:125033468-125033976;Right=chr9:125196755-125197388
chr9	CG	SV	125196755	125197388	112	-	.	ID=1487;Type=tandem-duplication;Left=chr9:125033468-125033976;Right=chr9:125196755-125197388
chr9	CG	SV	130413813	130414253	18	-	.	ID=1280;Type=interchromosomal;Left=chr9:130413813-130414253-;Right=chr15:73883920-73884413-;Distance=;DiscordantMatePairAlignments=18;LeftRepeat=Self chain;RightRepeat=L1MA5:LINE:L1;SegDup;Self chain;LeftGenes=NM_001130438:+;NM_003127:+;RightGenes=;XRef=;Frequency=0.00
chr15	CG	SV	73883920	73884413	18	-	.	ID=1280;Type=interchromosomal;Left=chr9:130413813-130414253-;Right=chr15:73883920-73884413-;Distance=;DiscordantMatePairAlignments=18;LeftRepeat=Self chain;RightRepeat=L1MA5:LINE:L1;SegDup;Self chain;LeftGenes=NM_001130438:+;NM_003127:+;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	52970367	53080080	16	.	.	ID=2730;Type=deletion;Left=chr10:52970367-52970567+;Right=chr10:53079669-53080080+;Distance=109302;DiscordantMatePairAlignments=16;LeftRepeat=Self chain;RightRepeat=MER51A:LTR:ERV1;Self chain;LeftGenes=NM_001098512:+;NM_006258:+;RightGenes=NM_001098512:+;NM_006258:+;XRef=;Frequency=0.00
chr10	CG	SV	52970367	52970567	16	+	.	ID=2730;Type=deletion;Left=chr10:52970367-52970567;Right=chr10:53079669-53080080
chr10	CG	SV	53079669	53080080	16	+	.	ID=2730;Type=deletion;Left=chr10:52970367-52970567;Right=chr10:53079669-53080080
chr10	CG	SV	53652480	53663405	25	.	.	ID=1413;Type=tandem-duplication;Left=chr10:53652480-53652666-;Right=chr10:53662943-53663405-;Distance=10739;DiscordantMatePairAlignments=25;LeftRepeat=Self chain;RightRepeat=L1PA2:LINE:L1;Self chain;LeftGenes=NM_001098512:+;NM_006258:+;RightGenes=NM_001098512:+;NM_006258:+;XRef=;Frequency=0.00
chr10	CG	SV	53652480	53652666	25	-	.	ID=1413;Type=tandem-duplication;Left=chr10:53652480-53652666;Right=chr10:53662943-53663405
chr10	CG	SV	53662943	53663405	25	-	.	ID=1413;Type=tandem-duplication;Left=chr10:53652480-53652666;Right=chr10:53662943-53663405
chr11	CG	SV	67086662	67089296	19	.	.	ID=2639;Type=deletion;Left=chr11:67086662-67087003+;Right=chr11:67089051-67089296+;Distance=2389;DiscordantMatePairAlignments=19;LeftRepeat=AluSq:SINE:Alu;Self chain;RightRepeat=AluSg/x:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr11	CG	SV	67086662	67087003	19	+	.	ID=2639;Type=deletion;Left=chr11:67086662-67087003;Right=chr11:67089051-67089296
chr11	CG	SV	67089051	67089296	19	+	.	ID=2639;Type=deletion;Left=chr11:67086662-67087003;Right=chr11:67089051-67089296
chr11	CG	SV	77981068	78127010	63	.	.	ID=680;Type=tandem-duplication;Left=chr11:77981068-77981521-;Right=chr11:78126465-78127010-;Distance=145489;DiscordantMatePairAlignments=63;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=;RightGenes=NM_001098816:-;XRef=;Frequency=0.00
chr11	CG	SV	77981068	77981521	63	-	.	ID=680;Type=tandem-duplication;Left=chr11:77981068-77981521;Right=chr11:78126465-78127010
chr11	CG	SV	78126465	78127010	63	-	.	ID=680;Type=tandem-duplication;Left=chr11:77981068-77981521;Right=chr11:78126465-78127010
chr11	CG	SV	84097602	84108078	45	.	.	ID=679;Type=tandem-duplication;Left=chr11:84097602-84098087-;Right=chr11:84107638-84108078-;Distance=9991;DiscordantMatePairAlignments=45;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001142699:-;NM_001364:-;RightGenes=NM_001142699:-;NM_001364:-;XRef=;Frequency=0.00
chr11	CG	SV	84097602	84098087	45	-	.	ID=679;Type=tandem-duplication;Left=chr11:84097602-84098087;Right=chr11:84107638-84108078
chr11	CG	SV	84107638	84108078	45	-	.	ID=679;Type=tandem-duplication;Left=chr11:84097602-84098087;Right=chr11:84107638-84108078
chr12	CG	SV	1185080	1203049	39	.	.	ID=2611;Type=deletion;Left=chr12:1185080-1185290+;Right=chr12:1202604-1203049+;Distance=17524;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=;LeftGenes=NM_178039:+;NM_178040:+;NR_027946:+;NR_027948:+;NR_027949:+;RightGenes=NM_178039:+;NM_178040:+;NR_027946:+;NR_027948:+;NR_027949:+;XRef=;Frequency=0.00
chr12	CG	SV	1185080	1185290	39	+	.	ID=2611;Type=deletion;Left=chr12:1185080-1185290;Right=chr12:1202604-1203049
chr12	CG	SV	1202604	1203049	39	+	.	ID=2611;Type=deletion;Left=chr12:1185080-1185290;Right=chr12:1202604-1203049
chr12	CG	SV	6718000	6719169	14	.	.	ID=2608;Type=deletion;Left=chr12:6718000-6718235+;Right=chr12:6718785-6719169+;Distance=785;DiscordantMatePairAlignments=14;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	6718000	6718235	14	+	.	ID=2608;Type=deletion;Left=chr12:6718000-6718235;Right=chr12:6718785-6719169
chr12	CG	SV	6718785	6719169	14	+	.	ID=2608;Type=deletion;Left=chr12:6718000-6718235;Right=chr12:6718785-6719169
chr12	CG	SV	16373604	16393835	39	.	.	ID=673;Type=tandem-duplication;Left=chr12:16373604-16374001-;Right=chr12:16393406-16393835-;Distance=19834;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=NM_020300:+;NM_145791:+;NM_145792:+;XRef=;Frequency=0.00
chr12	CG	SV	16373604	16374001	39	-	.	ID=673;Type=tandem-duplication;Left=chr12:16373604-16374001;Right=chr12:16393406-16393835
chr12	CG	SV	16393406	16393835	39	-	.	ID=673;Type=tandem-duplication;Left=chr12:16373604-16374001;Right=chr12:16393406-16393835
chr13	CG	SV	30094960	30096335	146	.	.	ID=2530;Type=deletion;Left=chr13:30094960-30095488+;Right=chr13:30095771-30096335+;Distance=811;DiscordantMatePairAlignments=146;LeftRepeat=;RightRepeat=MER21B:LTR:ERV1;LeftGenes=NM_005800:+;RightGenes=NM_005800:+;XRef=;Frequency=0.00
chr13	CG	SV	30094960	30095488	146	+	.	ID=2530;Type=deletion;Left=chr13:30094960-30095488;Right=chr13:30095771-30096335
chr13	CG	SV	30095771	30096335	146	+	.	ID=2530;Type=deletion;Left=chr13:30094960-30095488;Right=chr13:30095771-30096335
chr13	CG	SV	32129085	32129447	25	-	.	ID=564;Type=interchromosomal;Left=chr13:32129085-32129447-;Right=chr19:9804855-9805250+;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=L1PA14:LINE:L1;RightRepeat=AluJo:SINE:Alu;Self chain;LeftGenes=NM_015032:+;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	9804855	9805250	25	-	.	ID=564;Type=interchromosomal;Left=chr13:32129085-32129447-;Right=chr19:9804855-9805250+;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=L1PA14:LINE:L1;RightRepeat=AluJo:SINE:Alu;Self chain;LeftGenes=NM_015032:+;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	32230863	32231235	69	+	.	ID=4032;Type=complex;Left=chr13:32230863-32231235+;Right=chr20:18542247-18542725-;Distance=;DiscordantMatePairAlignments=69;LeftRepeat=Self chain;RightRepeat=AluJb:SINE:Alu;LeftGenes=NM_015032:+;RightGenes=NM_080820:+;XRef=;Frequency=0.00
chr20	CG	SV	18542247	18542725	69	+	.	ID=4032;Type=complex;Left=chr13:32230863-32231235+;Right=chr20:18542247-18542725-;Distance=;DiscordantMatePairAlignments=69;LeftRepeat=Self chain;RightRepeat=AluJb:SINE:Alu;LeftGenes=NM_015032:+;RightGenes=NM_080820:+;XRef=;Frequency=0.00
chr13	CG	SV	32394106	32542448	12	.	.	ID=562;Type=complex;Left=chr13:32394106-32394179-;Right=chr13:32541871-32542448+;Distance=147692;DiscordantMatePairAlignments=12;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	32394106	32394179	12	-	.	ID=562;Type=complex;Left=chr13:32394106-32394179;Right=chr13:32541871-32542448
chr13	CG	SV	32541871	32542448	12	-	.	ID=562;Type=complex;Left=chr13:32394106-32394179;Right=chr13:32541871-32542448
chr13	CG	SV	32394129	32549436	16	.	.	ID=576;Type=complex;Left=chr13:32394129-32394492-;Right=chr13:32548963-32549436-;Distance=154944;DiscordantMatePairAlignments=16;LeftRepeat=LTR16D:LTR:ERVL;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	32394129	32394492	16	-	.	ID=576;Type=complex;Left=chr13:32394129-32394492;Right=chr13:32548963-32549436
chr13	CG	SV	32548963	32549436	16	-	.	ID=576;Type=complex;Left=chr13:32394129-32394492;Right=chr13:32548963-32549436
chr13	CG	SV	32399223	32641774	19	.	.	ID=575;Type=tandem-duplication;Left=chr13:32399223-32399549-;Right=chr13:32641339-32641774-;Distance=242225;DiscordantMatePairAlignments=19;LeftRepeat=L1ME1:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=NM_052851:-;NM_178006:-;NM_178007:-;XRef=;Frequency=0.00
chr13	CG	SV	32399223	32399549	19	-	.	ID=575;Type=tandem-duplication;Left=chr13:32399223-32399549;Right=chr13:32641339-32641774
chr13	CG	SV	32641339	32641774	19	-	.	ID=575;Type=tandem-duplication;Left=chr13:32399223-32399549;Right=chr13:32641339-32641774
chr13	CG	SV	32640343	32640844	88	-	.	ID=561;Type=interchromosomal;Left=chr13:32640343-32640844-;Right=chr20:19930868-19931535+;Distance=;DiscordantMatePairAlignments=88;LeftRepeat=;RightRepeat=;LeftGenes=NM_052851:-;NM_178006:-;NM_178007:-;RightGenes=NM_018993:+;XRef=;Frequency=0.00
chr20	CG	SV	19930868	19931535	88	-	.	ID=561;Type=interchromosomal;Left=chr13:32640343-32640844-;Right=chr20:19930868-19931535+;Distance=;DiscordantMatePairAlignments=88;LeftRepeat=;RightRepeat=;LeftGenes=NM_052851:-;NM_178006:-;NM_178007:-;RightGenes=NM_018993:+;XRef=;Frequency=0.00
chr13	CG	SV	32666541	32667041	66	-	.	ID=560;Type=interchromosomal;Left=chr13:32666541-32667041-;Right=chr21:45619920-45620358-;Distance=;DiscordantMatePairAlignments=66;LeftRepeat=;RightRepeat=Self chain;Tandem period 11;Tandem period 25;Tandem period 36;Tandem period 61;LeftGenes=NM_052851:-;NM_178006:-;RightGenes=;XRef=;Frequency=0.00
chr21	CG	SV	45619920	45620358	66	-	.	ID=560;Type=interchromosomal;Left=chr13:32666541-32667041-;Right=chr21:45619920-45620358-;Distance=;DiscordantMatePairAlignments=66;LeftRepeat=;RightRepeat=Self chain;Tandem period 11;Tandem period 25;Tandem period 36;Tandem period 61;LeftGenes=NM_052851:-;NM_178006:-;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	84960033	85019936	11	.	.	ID=555;Type=tandem-duplication;Left=chr13:84960033-84960512-;Right=chr13:85019725-85019936-;Distance=59424;DiscordantMatePairAlignments=11;LeftRepeat=;RightRepeat=MSTC-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	84960033	84960512	11	-	.	ID=555;Type=tandem-duplication;Left=chr13:84960033-84960512;Right=chr13:85019725-85019936
chr13	CG	SV	85019725	85019936	11	-	.	ID=555;Type=tandem-duplication;Left=chr13:84960033-84960512;Right=chr13:85019725-85019936
chr14	CG	SV	22662700	27442360	13	.	.	ID=546;Type=tandem-duplication;Left=chr14:22662700-22663155-;Right=chr14:27442212-27442360-;Distance=4779205;DiscordantMatePairAlignments=13;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr14	CG	SV	22662700	22663155	13	-	.	ID=546;Type=tandem-duplication;Left=chr14:22662700-22663155;Right=chr14:27442212-27442360
chr14	CG	SV	27442212	27442360	13	-	.	ID=546;Type=tandem-duplication;Left=chr14:22662700-22663155;Right=chr14:27442212-27442360
chr14	CG	SV	33685685	33687462	66	.	.	ID=2455;Type=deletion;Left=chr14:33685685-33686168+;Right=chr14:33687010-33687462+;Distance=1325;DiscordantMatePairAlignments=66;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr14	CG	SV	33685685	33686168	66	+	.	ID=2455;Type=deletion;Left=chr14:33685685-33686168;Right=chr14:33687010-33687462
chr14	CG	SV	33687010	33687462	66	+	.	ID=2455;Type=deletion;Left=chr14:33685685-33686168;Right=chr14:33687010-33687462
chr14	CG	SV	63243922	63629872	54	.	.	ID=4162;Type=probable-inversion;Left=chr14:63243922-63244132+;Right=chr14:63629304-63629872-;Distance=385950;DiscordantMatePairAlignments=54;LeftRepeat=;RightRepeat=;LeftGenes=NM_030791:-;RightGenes=NM_015180:+;NM_182914:+;XRef=;Frequency=0.00
chr14	CG	SV	63243922	63244132	54	+	.	ID=4162;Type=probable-inversion;Left=chr14:63243922-63244132;Right=chr14:63629304-63629872
chr14	CG	SV	63629304	63629872	54	+	.	ID=4162;Type=probable-inversion;Left=chr14:63243922-63244132;Right=chr14:63629304-63629872
chr15	CG	SV	70139307	70294611	11	.	.	ID=501;Type=tandem-duplication;Left=chr15:70139307-70139794-;Right=chr15:70294203-70294611-;Distance=154817;DiscordantMatePairAlignments=11;LeftRepeat=(TAAAAA)n:Simple_repeat:Simple_repeat;Self chain;Tandem period 7;RightRepeat=Self chain;LeftGenes=NM_006901:-;RightGenes=NM_002654:-;NM_182470:-;NM_182471:-;XRef=;Frequency=0.00
chr15	CG	SV	70139307	70139794	11	-	.	ID=501;Type=tandem-duplication;Left=chr15:70139307-70139794;Right=chr15:70294203-70294611
chr15	CG	SV	70294203	70294611	11	-	.	ID=501;Type=tandem-duplication;Left=chr15:70139307-70139794;Right=chr15:70294203-70294611
chr16	CG	SV	1185867	1274956	14	.	.	ID=489;Type=tandem-duplication;Left=chr16:1185867-1186088-;Right=chr16:1274683-1274956-;Distance=88868;DiscordantMatePairAlignments=14;LeftRepeat=Self chain;RightRepeat=Self chain;Tandem period 20;LeftGenes=NM_001005407:+;NM_021098:+;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	1185867	1186088	14	-	.	ID=489;Type=tandem-duplication;Left=chr16:1185867-1186088;Right=chr16:1274683-1274956
chr16	CG	SV	1274683	1274956	14	-	.	ID=489;Type=tandem-duplication;Left=chr16:1185867-1186088;Right=chr16:1274683-1274956
chr16	CG	SV	77153911	77320099	84	.	.	ID=454;Type=tandem-duplication;Left=chr16:77153911-77154461-;Right=chr16:77319677-77320099-;Distance=165638;DiscordantMatePairAlignments=84;LeftRepeat=;RightRepeat=MIR3:SINE:MIR;LeftGenes=NM_016373:+;RightGenes=NM_016373:+;XRef=;Frequency=0.00
chr16	CG	SV	77153911	77154461	84	-	.	ID=454;Type=tandem-duplication;Left=chr16:77153911-77154461;Right=chr16:77319677-77320099
chr16	CG	SV	77319677	77320099	84	-	.	ID=454;Type=tandem-duplication;Left=chr16:77153911-77154461;Right=chr16:77319677-77320099
chr17	CG	SV	26581329	26581940	22	.	.	ID=4021;Type=probable-inversion;Left=chr17:26581329-26581494+;Right=chr17:26581472-26581940-;Distance=611;DiscordantMatePairAlignments=22;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=NM_000267:+;NM_001042492:+;RightGenes=NM_000267:+;NM_001042492:+;XRef=;Frequency=0.00
chr17	CG	SV	26581329	26581494	22	+	.	ID=4021;Type=probable-inversion;Left=chr17:26581329-26581494;Right=chr17:26581472-26581940
chr17	CG	SV	26581472	26581940	22	+	.	ID=4021;Type=probable-inversion;Left=chr17:26581329-26581494;Right=chr17:26581472-26581940
chr17	CG	SV	35256195	35257417	51	.	.	ID=2144;Type=deletion;Left=chr17:35256195-35256632+;Right=chr17:35256963-35257417+;Distance=768;DiscordantMatePairAlignments=51;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_012481:-;NM_183228:-;NM_183229:-;NM_183230:-;NM_183231:-;NM_183232:-;RightGenes=NM_012481:-;NM_183228:-;NM_183229:-;NM_183230:-;NM_183231:-;NM_183232:-;XRef=;Frequency=0.00
chr17	CG	SV	35256195	35256632	51	+	.	ID=2144;Type=deletion;Left=chr17:35256195-35256632;Right=chr17:35256963-35257417
chr17	CG	SV	35256963	35257417	51	+	.	ID=2144;Type=deletion;Left=chr17:35256195-35256632;Right=chr17:35256963-35257417
chr18	CG	SV	44378587	46768138	121	.	.	ID=378;Type=tandem-duplication;Left=chr18:44378587-44379122-;Right=chr18:46767721-46768138-;Distance=2389016;DiscordantMatePairAlignments=121;LeftRepeat=;RightRepeat=MER20B:DNA:MER1_type;LeftGenes=NM_001142397:+;NM_014772:+;RightGenes=NM_018696:+;XRef=;Frequency=0.00
chr18	CG	SV	44378587	44379122	121	-	.	ID=378;Type=tandem-duplication;Left=chr18:44378587-44379122;Right=chr18:46767721-46768138
chr18	CG	SV	46767721	46768138	121	-	.	ID=378;Type=tandem-duplication;Left=chr18:44378587-44379122;Right=chr18:46767721-46768138
chr19	CG	SV	902245	902747	20	+	.	ID=1950;Type=complex;Left=chr19:902245-902747+;Right=chr20:18542658-18543254+;Distance=;DiscordantMatePairAlignments=20;LeftRepeat=FLAM_C:SINE:Alu;Self chain;RightRepeat=AluJb:SINE:Alu;LeftGenes=NM_005224:+;RightGenes=NM_080820:+;XRef=;Frequency=0.00
chr20	CG	SV	18542658	18543254	20	+	.	ID=1950;Type=complex;Left=chr19:902245-902747+;Right=chr20:18542658-18543254+;Distance=;DiscordantMatePairAlignments=20;LeftRepeat=FLAM_C:SINE:Alu;Self chain;RightRepeat=AluJb:SINE:Alu;LeftGenes=NM_005224:+;RightGenes=NM_080820:+;XRef=;Frequency=0.00
chr19	CG	SV	8943608	18656438	134	.	.	ID=3996;Type=probable-inversion;Left=chr19:8943608-8943969+;Right=chr19:18655817-18656438-;Distance=9712830;DiscordantMatePairAlignments=134;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_024690:-;RightGenes=NM_001098482:+;NM_015321:+;XRef=;Frequency=0.00
chr19	CG	SV	8943608	8943969	134	+	.	ID=3996;Type=probable-inversion;Left=chr19:8943608-8943969;Right=chr19:18655817-18656438
chr19	CG	SV	18655817	18656438	134	+	.	ID=3996;Type=probable-inversion;Left=chr19:8943608-8943969;Right=chr19:18655817-18656438
chr19	CG	SV	44115509	44375931	21	.	.	ID=325;Type=tandem-duplication;Left=chr19:44115509-44115845-;Right=chr19:44375547-44375931-;Distance=260086;DiscordantMatePairAlignments=21;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	44115509	44115845	21	-	.	ID=325;Type=tandem-duplication;Left=chr19:44115509-44115845;Right=chr19:44375547-44375931
chr19	CG	SV	44375547	44375931	21	-	.	ID=325;Type=tandem-duplication;Left=chr19:44115509-44115845;Right=chr19:44375547-44375931
chr19	CG	SV	48532126	48537297	20	.	.	ID=259;Type=probable-inversion;Left=chr19:48532126-48532599-;Right=chr19:48536935-48537297+;Distance=4336;DiscordantMatePairAlignments=20;LeftRepeat=L2:LINE:L2;SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	48532126	48532599	20	-	.	ID=259;Type=probable-inversion;Left=chr19:48532126-48532599;Right=chr19:48536935-48537297
chr19	CG	SV	48536935	48537297	20	-	.	ID=259;Type=probable-inversion;Left=chr19:48532126-48532599;Right=chr19:48536935-48537297
chr19	CG	SV	49347259	49371384	210	.	.	ID=258;Type=probable-inversion;Left=chr19:49347259-49347897-;Right=chr19:49370888-49371384+;Distance=22991;DiscordantMatePairAlignments=210;LeftRepeat=MLT1D:LTR:MaLR;Self chain;Tandem period 18;RightRepeat=Self chain;LeftGenes=NM_001144824:+;NM_006630:+;RightGenes=NM_001032372:+;NM_001032373:+;NM_001032374:+;NM_001146220:+;NM_015919:+;XRef=;Frequency=0.00
chr19	CG	SV	49347259	49347897	210	-	.	ID=258;Type=probable-inversion;Left=chr19:49347259-49347897;Right=chr19:49370888-49371384
chr19	CG	SV	49370888	49371384	210	-	.	ID=258;Type=probable-inversion;Left=chr19:49347259-49347897;Right=chr19:49370888-49371384
chr19	CG	SV	49467081	49471080	398	.	.	ID=3994;Type=probable-inversion;Left=chr19:49467081-49467651+;Right=chr19:49470643-49471080-;Distance=3999;DiscordantMatePairAlignments=398;LeftRepeat=Self chain;RightRepeat=L2:LINE:L2;Self chain;LeftGenes=NM_181756:+;RightGenes=NM_181756:+;XRef=;Frequency=0.00
chr19	CG	SV	49467081	49467651	398	+	.	ID=3994;Type=probable-inversion;Left=chr19:49467081-49467651;Right=chr19:49470643-49471080
chr19	CG	SV	49470643	49471080	398	+	.	ID=3994;Type=probable-inversion;Left=chr19:49467081-49467651;Right=chr19:49470643-49471080
chr20	CG	SV	9973449	9976150	13	.	.	ID=1930;Type=deletion;Left=chr20:9973449-9973784+;Right=chr20:9975700-9976150+;Distance=2251;DiscordantMatePairAlignments=13;LeftRepeat=;RightRepeat=;LeftGenes=NM_022096:+;NM_198798:+;RightGenes=NM_022096:+;NM_198798:+;XRef=;Frequency=0.00
chr20	CG	SV	9973449	9973784	13	+	.	ID=1930;Type=deletion;Left=chr20:9973449-9973784;Right=chr20:9975700-9976150
chr20	CG	SV	9975700	9976150	13	+	.	ID=1930;Type=deletion;Left=chr20:9973449-9973784;Right=chr20:9975700-9976150
chr20	CG	SV	18152948	18157180	16	.	.	ID=252;Type=probable-inversion;Left=chr20:18152948-18153490-;Right=chr20:18157105-18157180+;Distance=3615;DiscordantMatePairAlignments=16;LeftRepeat=Self chain;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr20	CG	SV	18152948	18153490	16	-	.	ID=252;Type=probable-inversion;Left=chr20:18152948-18153490;Right=chr20:18157105-18157180
chr20	CG	SV	18157105	18157180	16	-	.	ID=252;Type=probable-inversion;Left=chr20:18152948-18153490;Right=chr20:18157105-18157180
chr20	CG	SV	61862278	61863262	21	.	.	ID=1890;Type=deletion;Left=chr20:61862278-61862466+;Right=chr20:61862811-61863262+;Distance=533;DiscordantMatePairAlignments=21;LeftRepeat=AluY:SINE:Alu;Self chain;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=NM_025224:-;RightGenes=NM_025224:-;XRef=;Frequency=0.00
chr20	CG	SV	61862278	61862466	21	+	.	ID=1890;Type=deletion;Left=chr20:61862278-61862466;Right=chr20:61862811-61863262
chr20	CG	SV	61862811	61863262	21	+	.	ID=1890;Type=deletion;Left=chr20:61862278-61862466;Right=chr20:61862811-61863262
chr20	CG	SV	61981411	61982380	25	.	.	ID=225;Type=deletion;Left=chr20:61981411-61981759+;Right=chr20:61982251-61982380+;Distance=840;DiscordantMatePairAlignments=25;LeftRepeat=Self chain;Tandem period 40;RightRepeat=Self chain;Tandem period 40;LeftGenes=NM_003288:+;NM_199359:+;NM_199360:+;NM_199361:+;NM_199362:+;NM_199363:+;RightGenes=NM_003288:+;NM_199359:+;NM_199360:+;NM_199361:+;NM_199362:+;NM_199363:+;XRef=;Frequency=0.10
chr20	CG	SV	61981411	61981759	25	+	.	ID=225;Type=deletion;Left=chr20:61981411-61981759;Right=chr20:61982251-61982380
chr20	CG	SV	61982251	61982380	25	+	.	ID=225;Type=deletion;Left=chr20:61981411-61981759;Right=chr20:61982251-61982380
chr22	CG	SV	48809296	48810347	13	.	.	ID=145;Type=deletion;Left=chr22:48809296-48809771+;Right=chr22:48809992-48810347+;Distance=696;DiscordantMatePairAlignments=13;LeftRepeat=Self chain;Tandem period 22;Tandem period 43;RightRepeat=Self chain;Tandem period 22;Tandem period 43;LeftGenes=NM_001080447:-;RightGenes=NM_001080447:-;XRef=rs71198204 (chr22:48809248-48809685);Frequency=0.06
chr22	CG	SV	48809296	48809771	13	+	.	ID=145;Type=deletion;Left=chr22:48809296-48809771;Right=chr22:48809992-48810347
chr22	CG	SV	48809992	48810347	13	+	.	ID=145;Type=deletion;Left=chr22:48809296-48809771;Right=chr22:48809992-48810347
chrX	CG	SV	16445835	32139586	23	.	.	ID=245;Type=tandem-duplication;Left=chrX:16445835-16446293-;Right=chrX:32139215-32139586-;Distance=15693293;DiscordantMatePairAlignments=23;LeftRepeat=L1M1:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_000109:-;NM_004006:-;NM_004007:-;NM_004009:-;NM_004010:-;NM_004011:-;NM_004012:-;XRef=;Frequency=0.00
chrX	CG	SV	16445835	16446293	23	-	.	ID=245;Type=tandem-duplication;Left=chrX:16445835-16446293;Right=chrX:32139215-32139586
chrX	CG	SV	32139215	32139586	23	-	.	ID=245;Type=tandem-duplication;Left=chrX:16445835-16446293;Right=chrX:32139215-32139586
chrX	CG	SV	34255556	64403828	27	.	.	ID=1222;Type=probable-inversion;Left=chrX:34255556-34255792+;Right=chrX:64403386-64403828-;Distance=30148272;DiscordantMatePairAlignments=27;LeftRepeat=Self chain;Tigger4(Zombi):DNA:MER2_type;RightRepeat=L1M4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	34255556	34255792	27	+	.	ID=1222;Type=probable-inversion;Left=chrX:34255556-34255792;Right=chrX:64403386-64403828
chrX	CG	SV	64403386	64403828	27	+	.	ID=1222;Type=probable-inversion;Left=chrX:34255556-34255792;Right=chrX:64403386-64403828
chrX	CG	SV	64475342	89728706	15	.	.	ID=238;Type=complex;Left=chrX:64475342-64475599-;Right=chrX:89728608-89728706-;Distance=25253107;DiscordantMatePairAlignments=15;LeftRepeat=L1P4:LINE:L1;Self chain;RightRepeat=L1PA16:LINE:L1;SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	64475342	64475599	15	-	.	ID=238;Type=complex;Left=chrX:64475342-64475599;Right=chrX:89728608-89728706
chrX	CG	SV	89728608	89728706	15	-	.	ID=238;Type=complex;Left=chrX:64475342-64475599;Right=chrX:89728608-89728706
chrX	CG	SV	64476116	89729501	21	.	.	ID=19;Type=complex;Left=chrX:64476116-64476577-;Right=chrX:89729120-89729501+;Distance=25252543;DiscordantMatePairAlignments=21;LeftRepeat=L1PA13:LINE:L1;Self chain;RightRepeat=L1PA16:LINE:L1;SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	64476116	64476577	21	-	.	ID=19;Type=complex;Left=chrX:64476116-64476577;Right=chrX:89729120-89729501
chrX	CG	SV	89729120	89729501	21	-	.	ID=19;Type=complex;Left=chrX:64476116-64476577;Right=chrX:89729120-89729501
chrX	CG	SV	64476582	89430477	20	.	.	ID=1216;Type=complex;Left=chrX:64476582-64477066+;Right=chrX:89430215-89430477-;Distance=24953895;DiscordantMatePairAlignments=20;LeftRepeat=L1PA13:LINE:L1;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	64476582	64477066	20	+	.	ID=1216;Type=complex;Left=chrX:64476582-64477066;Right=chrX:89430215-89430477
chrX	CG	SV	89430215	89430477	20	+	.	ID=1216;Type=complex;Left=chrX:64476582-64477066;Right=chrX:89430215-89430477
chrX	CG	SV	74070808	74077169	24	.	.	ID=124;Type=deletion;Left=chrX:74070808-74071243+;Right=chrX:74076765-74077169+;Distance=5957;DiscordantMatePairAlignments=24;LeftRepeat=MIR:SINE:MIR;Self chain;RightRepeat=L1PA15:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	74070808	74071243	24	+	.	ID=124;Type=deletion;Left=chrX:74070808-74071243;Right=chrX:74076765-74077169
chrX	CG	SV	74076765	74077169	24	+	.	ID=124;Type=deletion;Left=chrX:74070808-74071243;Right=chrX:74076765-74077169
chrX	CG	SV	81957906	81978585	50	.	.	ID=237;Type=tandem-duplication;Left=chrX:81957906-81958351-;Right=chrX:81978172-81978585-;Distance=20234;DiscordantMatePairAlignments=50;LeftRepeat=MLT1G1:LTR:MaLR;Self chain;RightRepeat=LTR29:LTR:ERV1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	81957906	81958351	50	-	.	ID=237;Type=tandem-duplication;Left=chrX:81957906-81958351;Right=chrX:81978172-81978585
chrX	CG	SV	81978172	81978585	50	-	.	ID=237;Type=tandem-duplication;Left=chrX:81957906-81958351;Right=chrX:81978172-81978585
chrX	CG	SV	117905654	117908307	40	.	.	ID=109;Type=deletion;Left=chrX:117905654-117906120+;Right=chrX:117907917-117908307+;Distance=2263;DiscordantMatePairAlignments=40;LeftRepeat=HERVP71A:LTR:ERV1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	117905654	117906120	40	+	.	ID=109;Type=deletion;Left=chrX:117905654-117906120;Right=chrX:117907917-117908307
chrX	CG	SV	117907917	117908307	40	+	.	ID=109;Type=deletion;Left=chrX:117905654-117906120;Right=chrX:117907917-117908307