chr1	CG	SV	10482369	10484387	10	.	.	ID=3899;Type=deletion;Left=chr1:10482369-10482956+;Right=chr1:10484223-10484387+;Distance=1854;DiscordantMatePairAlignments=10;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_004565:+;RightGenes=NM_004565:+;XRef=;Frequency=0.00
chr1	CG	SV	10482369	10482956	10	+	.	ID=3899;Type=deletion;Left=chr1:10482369-10482956;Right=chr1:10484223-10484387
chr1	CG	SV	10484223	10484387	10	+	.	ID=3899;Type=deletion;Left=chr1:10482369-10482956;Right=chr1:10484223-10484387
chr1	CG	SV	27997051	27997266	20	-	.	ID=422;Type=interchromosomal;Left=chr1:27997051-27997266-;Right=chr20:58911843-58912491+;Distance=;DiscordantMatePairAlignments=20;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=NM_177424:+;RightGenes=;XRef=;Frequency=0.00
chr20	CG	SV	58911843	58912491	20	-	.	ID=422;Type=interchromosomal;Left=chr1:27997051-27997266-;Right=chr20:58911843-58912491+;Distance=;DiscordantMatePairAlignments=20;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=NM_177424:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	220699143	220699647	11	+	.	ID=3267;Type=interchromosomal;Left=chr1:220699143-220699647+;Right=chr6:154179485-154179832+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=MSTA:LTR:MaLR;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	154179485	154179832	11	+	.	ID=3267;Type=interchromosomal;Left=chr1:220699143-220699647+;Right=chr6:154179485-154179832+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=MSTA:LTR:MaLR;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	224927489	224928041	94	+	.	ID=3821;Type=interchromosomal;Left=chr1:224927489-224928041+;Right=chrX:99131085-99131628-;Distance=;DiscordantMatePairAlignments=94;LeftRepeat=AluJb:SINE:Alu;RightRepeat=;LeftGenes=NM_002221:-;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	99131085	99131628	94	+	.	ID=3821;Type=interchromosomal;Left=chr1:224927489-224928041+;Right=chrX:99131085-99131628-;Distance=;DiscordantMatePairAlignments=94;LeftRepeat=AluJb:SINE:Alu;RightRepeat=;LeftGenes=NM_002221:-;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	234211106	234211297	39	-	.	ID=525;Type=interchromosomal;Left=chr1:234211106-234211297-;Right=chr6:114667957-114668569+;Distance=;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=;LeftGenes=NM_002508:-;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	114667957	114668569	39	-	.	ID=525;Type=interchromosomal;Left=chr1:234211106-234211297-;Right=chr6:114667957-114668569+;Distance=;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=;LeftGenes=NM_002508:-;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	7014439	7017945	65	.	.	ID=3754;Type=deletion;Left=chr2:7014439-7014961+;Right=chr2:7017433-7017945+;Distance=2994;DiscordantMatePairAlignments=65;LeftRepeat=;RightRepeat=MSTC:LTR:MaLR;LeftGenes=NM_014746:+;RightGenes=NM_014746:+;XRef=;Frequency=0.00
chr2	CG	SV	7014439	7014961	65	+	.	ID=3754;Type=deletion;Left=chr2:7014439-7014961;Right=chr2:7017433-7017945
chr2	CG	SV	7017433	7017945	65	+	.	ID=3754;Type=deletion;Left=chr2:7014439-7014961;Right=chr2:7017433-7017945
chr2	CG	SV	17109425	17110039	55	-	.	ID=524;Type=interchromosomal;Left=chr2:17109425-17110039-;Right=chr9:121845640-121846311+;Distance=;DiscordantMatePairAlignments=55;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	121845640	121846311	55	-	.	ID=524;Type=interchromosomal;Left=chr2:17109425-17110039-;Right=chr9:121845640-121846311+;Distance=;DiscordantMatePairAlignments=55;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	22721500	22721966	26	+	.	ID=4053;Type=interchromosomal;Left=chr2:22721500-22721966+;Right=chr5:2591838-2592296-;Distance=;DiscordantMatePairAlignments=26;LeftRepeat=L1MEc:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	2591838	2592296	26	+	.	ID=4053;Type=interchromosomal;Left=chr2:22721500-22721966+;Right=chr5:2591838-2592296-;Distance=;DiscordantMatePairAlignments=26;LeftRepeat=L1MEc:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	79970542	80021758	52	.	.	ID=1350;Type=tandem-duplication;Left=chr2:79970542-79970949-;Right=chr2:80021319-80021758-;Distance=50809;DiscordantMatePairAlignments=52;LeftRepeat=;RightRepeat=;LeftGenes=NM_001164883:+;NM_004389:+;RightGenes=NM_001164883:+;NM_004389:+;XRef=;Frequency=0.00
chr2	CG	SV	79970542	79970949	52	-	.	ID=1350;Type=tandem-duplication;Left=chr2:79970542-79970949;Right=chr2:80021319-80021758
chr2	CG	SV	80021319	80021758	52	-	.	ID=1350;Type=tandem-duplication;Left=chr2:79970542-79970949;Right=chr2:80021319-80021758
chr2	CG	SV	101343610	101347201	23	.	.	ID=3334;Type=deletion;Left=chr2:101343610-101344076+;Right=chr2:101346945-101347201+;Distance=3335;DiscordantMatePairAlignments=23;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=MER20B:DNA:MER1_type;Self chain;LeftGenes=NM_153836:-;RightGenes=NM_153836:-;XRef=;Frequency=0.00
chr2	CG	SV	101343610	101344076	23	+	.	ID=3334;Type=deletion;Left=chr2:101343610-101344076;Right=chr2:101346945-101347201
chr2	CG	SV	101346945	101347201	23	+	.	ID=3334;Type=deletion;Left=chr2:101343610-101344076;Right=chr2:101346945-101347201
chr2	CG	SV	217715924	217716219	22	-	.	ID=1158;Type=interchromosomal;Left=chr2:217715924-217716219-;Right=chr17:46221423-46221823-;Distance=;DiscordantMatePairAlignments=22;LeftRepeat=L1M5:LINE:L1;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr17	CG	SV	46221423	46221823	22	-	.	ID=1158;Type=interchromosomal;Left=chr2:217715924-217716219-;Right=chr17:46221423-46221823-;Distance=;DiscordantMatePairAlignments=22;LeftRepeat=L1M5:LINE:L1;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	8781351	9011298	70	.	.	ID=3187;Type=deletion;Left=chr3:8781351-8781875+;Right=chr3:9010819-9011298+;Distance=229468;DiscordantMatePairAlignments=70;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_000916:-;RightGenes=NM_001033117:-;NM_014850:-;XRef=;Frequency=0.00
chr3	CG	SV	8781351	8781875	70	+	.	ID=3187;Type=deletion;Left=chr3:8781351-8781875;Right=chr3:9010819-9011298
chr3	CG	SV	9010819	9011298	70	+	.	ID=3187;Type=deletion;Left=chr3:8781351-8781875;Right=chr3:9010819-9011298
chr3	CG	SV	75801870	75802698	10	+	.	ID=3703;Type=complex;Left=chr3:75801870-75802698+;Right=chr18:102200-102542-;Distance=;DiscordantMatePairAlignments=10;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	102200	102542	10	+	.	ID=3703;Type=complex;Left=chr3:75801870-75802698+;Right=chr18:102200-102542-;Distance=;DiscordantMatePairAlignments=10;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	118147530	118346258	26	.	.	ID=3132;Type=deletion;Left=chr3:118147530-118147972+;Right=chr3:118345751-118346258+;Distance=198221;DiscordantMatePairAlignments=26;LeftRepeat=FLAM_C:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	118147530	118147972	26	+	.	ID=3132;Type=deletion;Left=chr3:118147530-118147972;Right=chr3:118345751-118346258
chr3	CG	SV	118345751	118346258	26	+	.	ID=3132;Type=deletion;Left=chr3:118147530-118147972;Right=chr3:118345751-118346258
chr3	CG	SV	169685403	169730430	17	.	.	ID=1313;Type=tandem-duplication;Left=chr3:169685403-169685856-;Right=chr3:169729978-169730430-;Distance=44574;DiscordantMatePairAlignments=17;LeftRepeat=MER104:DNA:Tc2;RightRepeat=THE1C:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	169685403	169685856	17	-	.	ID=1313;Type=tandem-duplication;Left=chr3:169685403-169685856;Right=chr3:169729978-169730430
chr3	CG	SV	169729978	169730430	17	-	.	ID=1313;Type=tandem-duplication;Left=chr3:169685403-169685856;Right=chr3:169729978-169730430
chr3	CG	SV	175552534	175562478	49	.	.	ID=1312;Type=tandem-duplication;Left=chr3:175552534-175553075-;Right=chr3:175562079-175562478-;Distance=9403;DiscordantMatePairAlignments=49;LeftRepeat=L1MC3:LINE:L1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	175552534	175553075	49	-	.	ID=1312;Type=tandem-duplication;Left=chr3:175552534-175553075;Right=chr3:175562079-175562478
chr3	CG	SV	175562079	175562478	49	-	.	ID=1312;Type=tandem-duplication;Left=chr3:175552534-175553075;Right=chr3:175562079-175562478
chr4	CG	SV	36835296	36858979	23	.	.	ID=1306;Type=tandem-duplication;Left=chr4:36835296-36835833-;Right=chr4:36858605-36858979-;Distance=23146;DiscordantMatePairAlignments=23;LeftRepeat=MLT2B1:LTR:ERVL;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	36835296	36835833	23	-	.	ID=1306;Type=tandem-duplication;Left=chr4:36835296-36835833;Right=chr4:36858605-36858979
chr4	CG	SV	36858605	36858979	23	-	.	ID=1306;Type=tandem-duplication;Left=chr4:36835296-36835833;Right=chr4:36858605-36858979
chr4	CG	SV	191179112	191179707	16	-	.	ID=857;Type=complex;Left=chr4:191179112-191179707-;Right=chr18:102176-102542-;Distance=;DiscordantMatePairAlignments=16;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	102176	102542	16	-	.	ID=857;Type=complex;Left=chr4:191179112-191179707-;Right=chr18:102176-102542-;Distance=;DiscordantMatePairAlignments=16;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	4925476	4925936	49	+	.	ID=2845;Type=interchromosomal;Left=chr5:4925476-4925936+;Right=chr13:112066487-112066881+;Distance=;DiscordantMatePairAlignments=49;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	112066487	112066881	49	+	.	ID=2845;Type=interchromosomal;Left=chr5:4925476-4925936+;Right=chr13:112066487-112066881+;Distance=;DiscordantMatePairAlignments=49;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	14417509	19787928	21	.	.	ID=332;Type=probable-inversion;Left=chr5:14417509-14418087-;Right=chr5:19787585-19787928+;Distance=5369498;DiscordantMatePairAlignments=21;LeftRepeat=;RightRepeat=;LeftGenes=NM_007118:+;RightGenes=NM_001167667:-;NM_004934:-;XRef=;Frequency=0.00
chr5	CG	SV	14417509	14418087	21	-	.	ID=332;Type=probable-inversion;Left=chr5:14417509-14418087;Right=chr5:19787585-19787928
chr5	CG	SV	19787585	19787928	21	-	.	ID=332;Type=probable-inversion;Left=chr5:14417509-14418087;Right=chr5:19787585-19787928
chr5	CG	SV	16184880	16230925	52	.	.	ID=1119;Type=tandem-duplication;Left=chr5:16184880-16185352-;Right=chr5:16230506-16230925-;Distance=45573;DiscordantMatePairAlignments=52;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_001102562:-;RightGenes=NM_001102562:-;XRef=;Frequency=0.00
chr5	CG	SV	16184880	16185352	52	-	.	ID=1119;Type=tandem-duplication;Left=chr5:16184880-16185352;Right=chr5:16230506-16230925
chr5	CG	SV	16230506	16230925	52	-	.	ID=1119;Type=tandem-duplication;Left=chr5:16184880-16185352;Right=chr5:16230506-16230925
chr5	CG	SV	20340701	20356577	24	.	.	ID=1117;Type=tandem-duplication;Left=chr5:20340701-20341260-;Right=chr5:20356183-20356577-;Distance=15317;DiscordantMatePairAlignments=24;LeftRepeat=SegDup;Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	20340701	20341260	24	-	.	ID=1117;Type=tandem-duplication;Left=chr5:20340701-20341260;Right=chr5:20356183-20356577
chr5	CG	SV	20356183	20356577	24	-	.	ID=1117;Type=tandem-duplication;Left=chr5:20340701-20341260;Right=chr5:20356183-20356577
chr5	CG	SV	24463678	24464786	63	.	.	ID=2816;Type=deletion;Left=chr5:24463678-24464155+;Right=chr5:24464258-24464786+;Distance=580;DiscordantMatePairAlignments=63;LeftRepeat=ERVL-B4:LTR:ERVL;RightRepeat=ERVL-B4:LTR:ERVL;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	24463678	24464155	63	+	.	ID=2816;Type=deletion;Left=chr5:24463678-24464155;Right=chr5:24464258-24464786
chr5	CG	SV	24464258	24464786	63	+	.	ID=2816;Type=deletion;Left=chr5:24463678-24464155;Right=chr5:24464258-24464786
chr5	CG	SV	65539110	65563502	35	.	.	ID=2797;Type=deletion;Left=chr5:65539110-65539554+;Right=chr5:65562909-65563502+;Distance=23799;DiscordantMatePairAlignments=35;LeftRepeat=MER21C:LTR:ERV1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	65539110	65539554	35	+	.	ID=2797;Type=deletion;Left=chr5:65539110-65539554;Right=chr5:65562909-65563502
chr5	CG	SV	65562909	65563502	35	+	.	ID=2797;Type=deletion;Left=chr5:65539110-65539554;Right=chr5:65562909-65563502
chr5	CG	SV	104748273	104794604	27	.	.	ID=2772;Type=deletion;Left=chr5:104748273-104748546+;Right=chr5:104793958-104794604+;Distance=45685;DiscordantMatePairAlignments=27;LeftRepeat=MLT2C2:LTR:ERVL;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	104748273	104748546	27	+	.	ID=2772;Type=deletion;Left=chr5:104748273-104748546;Right=chr5:104793958-104794604
chr5	CG	SV	104793958	104794604	27	+	.	ID=2772;Type=deletion;Left=chr5:104748273-104748546;Right=chr5:104793958-104794604
chr5	CG	SV	120253252	120496330	38	.	.	ID=2766;Type=deletion;Left=chr5:120253252-120253816+;Right=chr5:120495940-120496330+;Distance=242688;DiscordantMatePairAlignments=38;LeftRepeat=L1P4:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	120253252	120253816	38	+	.	ID=2766;Type=deletion;Left=chr5:120253252-120253816;Right=chr5:120495940-120496330
chr5	CG	SV	120495940	120496330	38	+	.	ID=2766;Type=deletion;Left=chr5:120253252-120253816;Right=chr5:120495940-120496330
chr5	CG	SV	121952170	121955878	158	.	.	ID=2764;Type=deletion;Left=chr5:121952170-121952654+;Right=chr5:121955333-121955878+;Distance=3163;DiscordantMatePairAlignments=158;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	121952170	121952654	158	+	.	ID=2764;Type=deletion;Left=chr5:121952170-121952654;Right=chr5:121955333-121955878
chr5	CG	SV	121955333	121955878	158	+	.	ID=2764;Type=deletion;Left=chr5:121952170-121952654;Right=chr5:121955333-121955878
chr5	CG	SV	164671424	165140633	29	.	.	ID=2744;Type=deletion;Left=chr5:164671424-164671848+;Right=chr5:165140140-165140633+;Distance=468716;DiscordantMatePairAlignments=29;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	164671424	164671848	29	+	.	ID=2744;Type=deletion;Left=chr5:164671424-164671848;Right=chr5:165140140-165140633
chr5	CG	SV	165140140	165140633	29	+	.	ID=2744;Type=deletion;Left=chr5:164671424-164671848;Right=chr5:165140140-165140633
chr6	CG	SV	62606155	62609588	43	.	.	ID=1094;Type=tandem-duplication;Left=chr6:62606155-62606676-;Right=chr6:62609188-62609588-;Distance=2912;DiscordantMatePairAlignments=43;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_152688:-;RightGenes=NM_152688:-;XRef=;Frequency=0.00
chr6	CG	SV	62606155	62606676	43	-	.	ID=1094;Type=tandem-duplication;Left=chr6:62606155-62606676;Right=chr6:62609188-62609588
chr6	CG	SV	62609188	62609588	43	-	.	ID=1094;Type=tandem-duplication;Left=chr6:62606155-62606676;Right=chr6:62609188-62609588
chr6	CG	SV	101150766	101345173	25	.	.	ID=1090;Type=tandem-duplication;Left=chr6:101150766-101150970-;Right=chr6:101344723-101345173-;Distance=194203;DiscordantMatePairAlignments=25;LeftRepeat=L1M5:LINE:L1;RightRepeat=Self chain;LeftGenes=NM_006828:-;RightGenes=NM_006828:-;XRef=;Frequency=0.00
chr6	CG	SV	101150766	101150970	25	-	.	ID=1090;Type=tandem-duplication;Left=chr6:101150766-101150970;Right=chr6:101344723-101345173
chr6	CG	SV	101344723	101345173	25	-	.	ID=1090;Type=tandem-duplication;Left=chr6:101150766-101150970;Right=chr6:101344723-101345173
chr6	CG	SV	107555035	107556038	16	.	.	ID=320;Type=probable-inversion;Left=chr6:107555035-107555345-;Right=chr6:107555660-107556038+;Distance=315;DiscordantMatePairAlignments=16;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	107555035	107555345	16	-	.	ID=320;Type=probable-inversion;Left=chr6:107555035-107555345;Right=chr6:107555660-107556038
chr6	CG	SV	107555660	107556038	16	-	.	ID=320;Type=probable-inversion;Left=chr6:107555035-107555345;Right=chr6:107555660-107556038
chr6	CG	SV	138141278	138155014	68	.	.	ID=1085;Type=tandem-duplication;Left=chr6:138141278-138141828-;Right=chr6:138154473-138155014-;Distance=13186;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	138141278	138141828	68	-	.	ID=1085;Type=tandem-duplication;Left=chr6:138141278-138141828;Right=chr6:138154473-138155014
chr6	CG	SV	138154473	138155014	68	-	.	ID=1085;Type=tandem-duplication;Left=chr6:138141278-138141828;Right=chr6:138154473-138155014
chr6	CG	SV	143290679	143296362	31	.	.	ID=317;Type=probable-inversion;Left=chr6:143290679-143291260-;Right=chr6:143295957-143296362+;Distance=4697;DiscordantMatePairAlignments=31;LeftRepeat=;RightRepeat=;LeftGenes=NM_006734:-;RightGenes=NM_006734:-;XRef=;Frequency=0.00
chr6	CG	SV	143290679	143291260	31	-	.	ID=317;Type=probable-inversion;Left=chr6:143290679-143291260;Right=chr6:143295957-143296362
chr6	CG	SV	143295957	143296362	31	-	.	ID=317;Type=probable-inversion;Left=chr6:143290679-143291260;Right=chr6:143295957-143296362
chr6	CG	SV	158696137	158696542	43	+	.	ID=3549;Type=interchromosomal;Left=chr6:158696137-158696542+;Right=chr17:75403713-75404151-;Distance=;DiscordantMatePairAlignments=43;LeftRepeat=AluJo:SINE:Alu;RightRepeat=;LeftGenes=NM_001007466:+;NM_020245:+;RightGenes=;XRef=;Frequency=0.00
chr17	CG	SV	75403713	75404151	43	+	.	ID=3549;Type=interchromosomal;Left=chr6:158696137-158696542+;Right=chr17:75403713-75404151-;Distance=;DiscordantMatePairAlignments=43;LeftRepeat=AluJo:SINE:Alu;RightRepeat=;LeftGenes=NM_001007466:+;NM_020245:+;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	3315441	3323428	18	.	.	ID=2617;Type=deletion;Left=chr7:3315441-3315869+;Right=chr7:3322961-3323428+;Distance=7520;DiscordantMatePairAlignments=18;LeftRepeat=;RightRepeat=;LeftGenes=NM_152744:+;RightGenes=NM_152744:+;XRef=;Frequency=0.00
chr7	CG	SV	3315441	3315869	18	+	.	ID=2617;Type=deletion;Left=chr7:3315441-3315869;Right=chr7:3322961-3323428
chr7	CG	SV	3322961	3323428	18	+	.	ID=2617;Type=deletion;Left=chr7:3315441-3315869;Right=chr7:3322961-3323428
chr7	CG	SV	53309009	53312152	38	.	.	ID=2593;Type=deletion;Left=chr7:53309009-53309595+;Right=chr7:53311820-53312152+;Distance=2811;DiscordantMatePairAlignments=38;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	53309009	53309595	38	+	.	ID=2593;Type=deletion;Left=chr7:53309009-53309595;Right=chr7:53311820-53312152
chr7	CG	SV	53311820	53312152	38	+	.	ID=2593;Type=deletion;Left=chr7:53309009-53309595;Right=chr7:53311820-53312152
chr7	CG	SV	71283862	71374368	36	.	.	ID=1051;Type=tandem-duplication;Left=chr7:71283862-71284485-;Right=chr7:71373985-71374368-;Distance=89883;DiscordantMatePairAlignments=36;LeftRepeat=AluSg:SINE:Alu;Self chain;RightRepeat=FRAM:SINE:Alu;Self chain;LeftGenes=NM_001017440:-;NM_031468:-;RightGenes=NM_001017440:-;NM_031468:-;XRef=;Frequency=0.00
chr7	CG	SV	71283862	71284485	36	-	.	ID=1051;Type=tandem-duplication;Left=chr7:71283862-71284485;Right=chr7:71373985-71374368
chr7	CG	SV	71373985	71374368	36	-	.	ID=1051;Type=tandem-duplication;Left=chr7:71283862-71284485;Right=chr7:71373985-71374368
chr7	CG	SV	71533985	71541939	13	.	.	ID=2580;Type=deletion;Left=chr7:71533985-71534594+;Right=chr7:71541170-71541939+;Distance=7185;DiscordantMatePairAlignments=13;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=AluJo:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	71533985	71534594	13	+	.	ID=2580;Type=deletion;Left=chr7:71533985-71534594;Right=chr7:71541170-71541939
chr7	CG	SV	71541170	71541939	13	+	.	ID=2580;Type=deletion;Left=chr7:71533985-71534594;Right=chr7:71541170-71541939
chr7	CG	SV	110392640	110517844	31	.	.	ID=2544;Type=deletion;Left=chr7:110392640-110393125+;Right=chr7:110517355-110517844+;Distance=124715;DiscordantMatePairAlignments=31;LeftRepeat=;RightRepeat=;LeftGenes=NM_032549:-;RightGenes=NM_032549:-;XRef=;Frequency=0.00
chr7	CG	SV	110392640	110393125	31	+	.	ID=2544;Type=deletion;Left=chr7:110392640-110393125;Right=chr7:110517355-110517844
chr7	CG	SV	110517355	110517844	31	+	.	ID=2544;Type=deletion;Left=chr7:110392640-110393125;Right=chr7:110517355-110517844
chr7	CG	SV	151795728	151796886	34	.	.	ID=2518;Type=deletion;Left=chr7:151795728-151796146+;Right=chr7:151796399-151796886+;Distance=671;DiscordantMatePairAlignments=34;LeftRepeat=AluSq:SINE:Alu;Self chain;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	151795728	151796146	34	+	.	ID=2518;Type=deletion;Left=chr7:151795728-151796146;Right=chr7:151796399-151796886
chr7	CG	SV	151796399	151796886	34	+	.	ID=2518;Type=deletion;Left=chr7:151795728-151796146;Right=chr7:151796399-151796886
chr7	CG	SV	156789004	156790119	11	.	.	ID=2508;Type=deletion;Left=chr7:156789004-156789430+;Right=chr7:156789828-156790119+;Distance=824;DiscordantMatePairAlignments=11;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	156789004	156789430	11	+	.	ID=2508;Type=deletion;Left=chr7:156789004-156789430;Right=chr7:156789828-156790119
chr7	CG	SV	156789828	156790119	11	+	.	ID=2508;Type=deletion;Left=chr7:156789004-156789430;Right=chr7:156789828-156790119
chr8	CG	SV	8764151	8766633	53	.	.	ID=2489;Type=deletion;Left=chr8:8764151-8764638+;Right=chr8:8766092-8766633+;Distance=1941;DiscordantMatePairAlignments=53;LeftRepeat=Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_004225:-;RightGenes=NM_004225:-;XRef=;Frequency=0.00
chr8	CG	SV	8764151	8764638	53	+	.	ID=2489;Type=deletion;Left=chr8:8764151-8764638;Right=chr8:8766092-8766633
chr8	CG	SV	8766092	8766633	53	+	.	ID=2489;Type=deletion;Left=chr8:8764151-8764638;Right=chr8:8766092-8766633
chr8	CG	SV	124526381	124651820	27	.	.	ID=2434;Type=deletion;Left=chr8:124526381-124526844+;Right=chr8:124651301-124651820+;Distance=124920;DiscordantMatePairAlignments=27;LeftRepeat=;RightRepeat=MLT1D:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	124526381	124526844	27	+	.	ID=2434;Type=deletion;Left=chr8:124526381-124526844;Right=chr8:124651301-124651820
chr8	CG	SV	124651301	124651820	27	+	.	ID=2434;Type=deletion;Left=chr8:124526381-124526844;Right=chr8:124651301-124651820
chr8	CG	SV	127376930	127377384	59	-	.	ID=832;Type=complex;Left=chr8:127376930-127377384-;Right=chr19:60606090-60606504-;Distance=;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=AluJo:SINE:Alu;Self chain;LeftGenes=;RightGenes=NM_014501:-;XRef=;Frequency=0.00
chr19	CG	SV	60606090	60606504	59	-	.	ID=832;Type=complex;Left=chr8:127376930-127377384-;Right=chr19:60606090-60606504-;Distance=;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=AluJo:SINE:Alu;Self chain;LeftGenes=;RightGenes=NM_014501:-;XRef=;Frequency=0.00
chr8	CG	SV	128958553	128959226	232	+	.	ID=3501;Type=interchromosomal;Left=chr8:128958553-128959226+;Right=chrX:73123371-73123950-;Distance=;DiscordantMatePairAlignments=232;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NR_003367:+;RightGenes=NR_024582:+;XRef=;Frequency=0.00
chrX	CG	SV	73123371	73123950	232	+	.	ID=3501;Type=interchromosomal;Left=chr8:128958553-128959226+;Right=chrX:73123371-73123950-;Distance=;DiscordantMatePairAlignments=232;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NR_003367:+;RightGenes=NR_024582:+;XRef=;Frequency=0.00
chr8	CG	SV	136784571	136787585	96	.	.	ID=1025;Type=tandem-duplication;Left=chr8:136784571-136785168-;Right=chr8:136787055-136787585-;Distance=2417;DiscordantMatePairAlignments=96;LeftRepeat=L1MEd:LINE:L1;RightRepeat=MLT2E:LTR:ERVL;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	136784571	136785168	96	-	.	ID=1025;Type=tandem-duplication;Left=chr8:136784571-136785168;Right=chr8:136787055-136787585
chr8	CG	SV	136787055	136787585	96	-	.	ID=1025;Type=tandem-duplication;Left=chr8:136784571-136785168;Right=chr8:136787055-136787585
chr9	CG	SV	75549991	75550404	19	-	.	ID=86;Type=interchromosomal;Left=chr9:75549991-75550404-;Right=chrX:72225872-72226317+;Distance=;DiscordantMatePairAlignments=19;LeftRepeat=L1PA16:LINE:L1;RightRepeat=L1M4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	72225872	72226317	19	-	.	ID=86;Type=interchromosomal;Left=chr9:75549991-75550404-;Right=chrX:72225872-72226317+;Distance=;DiscordantMatePairAlignments=19;LeftRepeat=L1PA16:LINE:L1;RightRepeat=L1M4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	118038697	118256269	123	.	.	ID=2367;Type=deletion;Left=chr9:118038697-118039336+;Right=chr9:118255720-118256269+;Distance=217023;DiscordantMatePairAlignments=123;LeftRepeat=AluSq:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_002581:+;RightGenes=NM_014010:-;NM_198186:-;NM_198187:-;NM_198188:-;XRef=;Frequency=0.00
chr9	CG	SV	118038697	118039336	123	+	.	ID=2367;Type=deletion;Left=chr9:118038697-118039336;Right=chr9:118255720-118256269
chr9	CG	SV	118255720	118256269	123	+	.	ID=2367;Type=deletion;Left=chr9:118038697-118039336;Right=chr9:118255720-118256269
chr9	CG	SV	118266861	118270833	127	.	.	ID=2366;Type=deletion;Left=chr9:118266861-118267327+;Right=chr9:118270262-118270833+;Distance=3401;DiscordantMatePairAlignments=127;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_014010:-;NM_198186:-;NM_198187:-;NM_198188:-;RightGenes=NM_014010:-;NM_198186:-;NM_198187:-;NM_198188:-;XRef=;Frequency=0.00
chr9	CG	SV	118266861	118267327	127	+	.	ID=2366;Type=deletion;Left=chr9:118266861-118267327;Right=chr9:118270262-118270833
chr9	CG	SV	118270262	118270833	127	+	.	ID=2366;Type=deletion;Left=chr9:118266861-118267327;Right=chr9:118270262-118270833
chr9	CG	SV	118746773	119112713	64	.	.	ID=2363;Type=deletion;Left=chr9:118746773-118747424+;Right=chr9:119112244-119112713+;Distance=365471;DiscordantMatePairAlignments=64;LeftRepeat=AluSx:SINE:Alu;RightRepeat=(CATA)n:Simple_repeat:Simple_repeat;Self chain;LeftGenes=NM_014010:-;NM_198186:-;NM_198187:-;RightGenes=NM_014010:-;NM_198186:-;NM_198187:-;XRef=;Frequency=0.00
chr9	CG	SV	118746773	118747424	64	+	.	ID=2363;Type=deletion;Left=chr9:118746773-118747424;Right=chr9:119112244-119112713
chr9	CG	SV	119112244	119112713	64	+	.	ID=2363;Type=deletion;Left=chr9:118746773-118747424;Right=chr9:119112244-119112713
chr9	CG	SV	121829943	121849385	23	.	.	ID=3623;Type=probable-inversion;Left=chr9:121829943-121830257+;Right=chr9:121848942-121849385-;Distance=19442;DiscordantMatePairAlignments=23;LeftRepeat=;RightRepeat=Tigger3b:DNA:MER2_type;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	121829943	121830257	23	+	.	ID=3623;Type=probable-inversion;Left=chr9:121829943-121830257;Right=chr9:121848942-121849385
chr9	CG	SV	121848942	121849385	23	+	.	ID=3623;Type=probable-inversion;Left=chr9:121829943-121830257;Right=chr9:121848942-121849385
chr9	CG	SV	122527174	123058804	61	.	.	ID=1014;Type=tandem-duplication;Left=chr9:122527174-122527431-;Right=chr9:123058215-123058804-;Distance=531373;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=AluSq:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	122527174	122527431	61	-	.	ID=1014;Type=tandem-duplication;Left=chr9:122527174-122527431;Right=chr9:123058215-123058804
chr9	CG	SV	123058215	123058804	61	-	.	ID=1014;Type=tandem-duplication;Left=chr9:122527174-122527431;Right=chr9:123058215-123058804
chr9	CG	SV	122733488	122775193	94	.	.	ID=3622;Type=distal-duplication;Left=chr9:122733488-122733903+;Right=chr9:122774686-122775193-;Distance=41705;DiscordantMatePairAlignments=94;LeftRepeat=Self chain;RightRepeat=(TTTAA)n:Simple_repeat:Simple_repeat;LeftGenes=;RightGenes=NM_001735:-;XRef=;Frequency=0.00
chr9	CG	SV	122733488	122733903	94	+	.	ID=3622;Type=distal-duplication;Left=chr9:122733488-122733903;Right=chr9:122774686-122775193
chr9	CG	SV	122774686	122775193	94	+	.	ID=3622;Type=distal-duplication;Left=chr9:122733488-122733903;Right=chr9:122774686-122775193
chr9	CG	SV	122733846	122743678	161	.	.	ID=275;Type=distal-duplication;Left=chr9:122733846-122734331-;Right=chr9:122743021-122743678+;Distance=8690;DiscordantMatePairAlignments=161;LeftRepeat=;RightRepeat=MLT1C:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	122733846	122734331	161	-	.	ID=275;Type=distal-duplication;Left=chr9:122733846-122734331;Right=chr9:122743021-122743678
chr9	CG	SV	122743021	122743678	161	-	.	ID=275;Type=distal-duplication;Left=chr9:122733846-122734331;Right=chr9:122743021-122743678
chr9	CG	SV	126338340	126338955	127	+	.	ID=1904;Type=interchromosomal;Left=chr9:126338340-126338955+;Right=chrX:71238542-71239062+;Distance=;DiscordantMatePairAlignments=127;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_001489:-;NM_033334:-;RightGenes=NM_001013627:+;XRef=;Frequency=0.00
chrX	CG	SV	71238542	71239062	127	+	.	ID=1904;Type=interchromosomal;Left=chr9:126338340-126338955+;Right=chrX:71238542-71239062+;Distance=;DiscordantMatePairAlignments=127;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_001489:-;NM_033334:-;RightGenes=NM_001013627:+;XRef=;Frequency=0.00
chr9	CG	SV	129739334	129742403	42	.	.	ID=3621;Type=probable-inversion;Left=chr9:129739334-129739855+;Right=chr9:129741883-129742403-;Distance=3069;DiscordantMatePairAlignments=42;LeftRepeat=MIR:SINE:MIR;RightRepeat=MIRm:SINE:MIR;LeftGenes=NM_003863:-;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	129739334	129739855	42	+	.	ID=3621;Type=probable-inversion;Left=chr9:129739334-129739855;Right=chr9:129741883-129742403
chr9	CG	SV	129741883	129742403	42	+	.	ID=3621;Type=probable-inversion;Left=chr9:129739334-129739855;Right=chr9:129741883-129742403
chr9	CG	SV	130881752	130882245	60	+	.	ID=2111;Type=interchromosomal;Left=chr9:130881752-130882245+;Right=chr13:84855587-84856007+;Distance=;DiscordantMatePairAlignments=60;LeftRepeat=AluSc:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	84855587	84856007	60	+	.	ID=2111;Type=interchromosomal;Left=chr9:130881752-130882245+;Right=chr13:84855587-84856007+;Distance=;DiscordantMatePairAlignments=60;LeftRepeat=AluSc:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	134378623	134379060	47	-	.	ID=919;Type=interchromosomal;Left=chr9:134378623-134379060-;Right=chr13:31015480-31015963-;Distance=;DiscordantMatePairAlignments=47;LeftRepeat=;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_207417:+;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	31015480	31015963	47	-	.	ID=919;Type=interchromosomal;Left=chr9:134378623-134379060-;Right=chr13:31015480-31015963-;Distance=;DiscordantMatePairAlignments=47;LeftRepeat=;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_207417:+;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	140032195	140034049	23	.	.	ID=2342;Type=deletion;Left=chr9:140032195-140032516+;Right=chr9:140033860-140034049+;Distance=1665;DiscordantMatePairAlignments=23;LeftRepeat=Self chain;Tandem period 37;RightRepeat=Self chain;Tandem period 37;LeftGenes=NM_000718:+;RightGenes=NM_000718:+;XRef=;Frequency=0.06
chr9	CG	SV	140032195	140032516	23	+	.	ID=2342;Type=deletion;Left=chr9:140032195-140032516;Right=chr9:140033860-140034049
chr9	CG	SV	140033860	140034049	23	+	.	ID=2342;Type=deletion;Left=chr9:140032195-140032516;Right=chr9:140033860-140034049
chr10	CG	SV	27482760	61185883	40	.	.	ID=269;Type=probable-inversion;Left=chr10:27482760-27483457-;Right=chr10:61185535-61185883+;Distance=33702078;DiscordantMatePairAlignments=40;LeftRepeat=Self chain;RightRepeat=MLT1C:LTR:MaLR;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	27482760	27483457	40	-	.	ID=269;Type=probable-inversion;Left=chr10:27482760-27483457;Right=chr10:61185535-61185883
chr10	CG	SV	61185535	61185883	40	-	.	ID=269;Type=probable-inversion;Left=chr10:27482760-27483457;Right=chr10:61185535-61185883
chr10	CG	SV	29016808	29018646	24	.	.	ID=271;Type=probable-inversion;Left=chr10:29016808-29017163-;Right=chr10:29018334-29018646+;Distance=1171;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=AluJo:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	29016808	29017163	24	-	.	ID=271;Type=probable-inversion;Left=chr10:29016808-29017163;Right=chr10:29018334-29018646
chr10	CG	SV	29018334	29018646	24	-	.	ID=271;Type=probable-inversion;Left=chr10:29016808-29017163;Right=chr10:29018334-29018646
chr10	CG	SV	52657709	52930781	62	.	.	ID=2301;Type=deletion;Left=chr10:52657709-52658265+;Right=chr10:52930251-52930781+;Distance=272542;DiscordantMatePairAlignments=62;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001098512:+;NM_006258:+;RightGenes=NM_001098512:+;NM_006258:+;XRef=;Frequency=0.00
chr10	CG	SV	52657709	52658265	62	+	.	ID=2301;Type=deletion;Left=chr10:52657709-52658265;Right=chr10:52930251-52930781
chr10	CG	SV	52930251	52930781	62	+	.	ID=2301;Type=deletion;Left=chr10:52657709-52658265;Right=chr10:52930251-52930781
chr10	CG	SV	59943899	72057756	44	.	.	ID=3606;Type=complex;Left=chr10:59943899-59944447+;Right=chr10:72057277-72057756-;Distance=12113857;DiscordantMatePairAlignments=44;LeftRepeat=Self chain;RightRepeat=L1MB7:LINE:L1;Self chain;LeftGenes=NM_001080512:+;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	59943899	59944447	44	+	.	ID=3606;Type=complex;Left=chr10:59943899-59944447;Right=chr10:72057277-72057756
chr10	CG	SV	72057277	72057756	44	+	.	ID=3606;Type=complex;Left=chr10:59943899-59944447;Right=chr10:72057277-72057756
chr10	CG	SV	62860591	72058330	17	.	.	ID=2291;Type=complex;Left=chr10:62860591-62861065+;Right=chr10:72057866-72058330+;Distance=9197275;DiscordantMatePairAlignments=17;LeftRepeat=L1MC1:LINE:L1;Self chain;RightRepeat=L1MB7:LINE:L1;Self chain;LeftGenes=NM_178505:-;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	62860591	62861065	17	+	.	ID=2291;Type=complex;Left=chr10:62860591-62861065;Right=chr10:72057866-72058330
chr10	CG	SV	72057866	72058330	17	+	.	ID=2291;Type=complex;Left=chr10:62860591-62861065;Right=chr10:72057866-72058330
chr10	CG	SV	75474370	75755170	14	.	.	ID=2290;Type=deletion;Left=chr10:75474370-75474616+;Right=chr10:75754722-75755170+;Distance=280352;DiscordantMatePairAlignments=14;LeftRepeat=L1ME3B:LINE:L1;Self chain;RightRepeat=L1MA6:LINE:L1;Self chain;LeftGenes=NM_003373:+;NM_014000:+;RightGenes=NM_001123:+;NM_006721:+;XRef=;Frequency=0.00
chr10	CG	SV	75474370	75474616	14	+	.	ID=2290;Type=deletion;Left=chr10:75474370-75474616;Right=chr10:75754722-75755170
chr10	CG	SV	75754722	75755170	14	+	.	ID=2290;Type=deletion;Left=chr10:75474370-75474616;Right=chr10:75754722-75755170
chr10	CG	SV	119189274	119191809	83	.	.	ID=2268;Type=deletion;Left=chr10:119189274-119189823+;Right=chr10:119191396-119191809+;Distance=2122;DiscordantMatePairAlignments=83;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	119189274	119189823	83	+	.	ID=2268;Type=deletion;Left=chr10:119189274-119189823;Right=chr10:119191396-119191809
chr10	CG	SV	119191396	119191809	83	+	.	ID=2268;Type=deletion;Left=chr10:119189274-119189823;Right=chr10:119191396-119191809
chr11	CG	SV	19708432	19714663	55	.	.	ID=2233;Type=deletion;Left=chr11:19708432-19708989+;Right=chr11:19714181-19714663+;Distance=5749;DiscordantMatePairAlignments=55;LeftRepeat=;RightRepeat=;LeftGenes=NM_001111018:+;NM_145117:+;NM_182964:+;RightGenes=NM_001111018:+;NM_145117:+;NM_182964:+;XRef=;Frequency=0.00
chr11	CG	SV	19708432	19708989	55	+	.	ID=2233;Type=deletion;Left=chr11:19708432-19708989;Right=chr11:19714181-19714663
chr11	CG	SV	19714181	19714663	55	+	.	ID=2233;Type=deletion;Left=chr11:19708432-19708989;Right=chr11:19714181-19714663
chr11	CG	SV	122515941	122737846	77	.	.	ID=931;Type=tandem-duplication;Left=chr11:122515941-122516506-;Right=chr11:122737369-122737846-;Distance=221340;DiscordantMatePairAlignments=77;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_024769:-;RightGenes=;XRef=;Frequency=0.00
chr11	CG	SV	122515941	122516506	77	-	.	ID=931;Type=tandem-duplication;Left=chr11:122515941-122516506;Right=chr11:122737369-122737846
chr11	CG	SV	122737369	122737846	77	-	.	ID=931;Type=tandem-duplication;Left=chr11:122515941-122516506;Right=chr11:122737369-122737846
chr12	CG	SV	6718000	6719175	17	.	.	ID=2163;Type=deletion;Left=chr12:6718000-6718337+;Right=chr12:6718785-6719175+;Distance=785;DiscordantMatePairAlignments=17;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	6718000	6718337	17	+	.	ID=2163;Type=deletion;Left=chr12:6718000-6718337;Right=chr12:6718785-6719175
chr12	CG	SV	6718785	6719175	17	+	.	ID=2163;Type=deletion;Left=chr12:6718000-6718337;Right=chr12:6718785-6719175
chr13	CG	SV	30094958	30096299	46	.	.	ID=2087;Type=deletion;Left=chr13:30094958-30095272+;Right=chr13:30095770-30096299+;Distance=812;DiscordantMatePairAlignments=46;LeftRepeat=;RightRepeat=MER21B:LTR:ERV1;LeftGenes=NM_005800:+;RightGenes=NM_005800:+;XRef=;Frequency=0.00
chr13	CG	SV	30094958	30095272	46	+	.	ID=2087;Type=deletion;Left=chr13:30094958-30095272;Right=chr13:30095770-30096299
chr13	CG	SV	30095770	30096299	46	+	.	ID=2087;Type=deletion;Left=chr13:30094958-30095272;Right=chr13:30095770-30096299
chr13	CG	SV	62024188	68619584	22	.	.	ID=226;Type=probable-inversion;Left=chr13:62024188-62024590-;Right=chr13:68619141-68619584+;Distance=6594551;DiscordantMatePairAlignments=22;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	62024188	62024590	22	-	.	ID=226;Type=probable-inversion;Left=chr13:62024188-62024590;Right=chr13:68619141-68619584
chr13	CG	SV	68619141	68619584	22	-	.	ID=226;Type=probable-inversion;Left=chr13:62024188-62024590;Right=chr13:68619141-68619584
chr13	CG	SV	89160806	89182894	17	.	.	ID=3564;Type=probable-inversion;Left=chr13:89160806-89161288+;Right=chr13:89182455-89182894-;Distance=22088;DiscordantMatePairAlignments=17;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	89160806	89161288	17	+	.	ID=3564;Type=probable-inversion;Left=chr13:89160806-89161288;Right=chr13:89182455-89182894
chr13	CG	SV	89182455	89182894	17	+	.	ID=3564;Type=probable-inversion;Left=chr13:89160806-89161288;Right=chr13:89182455-89182894
chr13	CG	SV	99323149	111745204	28	.	.	ID=223;Type=probable-inversion;Left=chr13:99323149-99323725-;Right=chr13:111744707-111745204+;Distance=12420982;DiscordantMatePairAlignments=28;LeftRepeat=;RightRepeat=;LeftGenes=NM_206808:+;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	99323149	99323725	28	-	.	ID=223;Type=probable-inversion;Left=chr13:99323149-99323725;Right=chr13:111744707-111745204
chr13	CG	SV	111744707	111745204	28	-	.	ID=223;Type=probable-inversion;Left=chr13:99323149-99323725;Right=chr13:111744707-111745204
chr13	CG	SV	103570461	104881237	26	.	.	ID=2054;Type=deletion;Left=chr13:103570461-103570919+;Right=chr13:104880997-104881237+;Distance=1310536;DiscordantMatePairAlignments=26;LeftRepeat=L1MCc:LINE:L1;Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	103570461	103570919	26	+	.	ID=2054;Type=deletion;Left=chr13:103570461-103570919;Right=chr13:104880997-104881237
chr13	CG	SV	104880997	104881237	26	+	.	ID=2054;Type=deletion;Left=chr13:103570461-103570919;Right=chr13:104880997-104881237
chr15	CG	SV	23497200	23504594	59	.	.	ID=876;Type=tandem-duplication;Left=chr15:23497200-23497698-;Right=chr15:23504009-23504594-;Distance=6896;DiscordantMatePairAlignments=59;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_024490:-;RightGenes=NM_024490:-;XRef=;Frequency=0.00
chr15	CG	SV	23497200	23497698	59	-	.	ID=876;Type=tandem-duplication;Left=chr15:23497200-23497698;Right=chr15:23504009-23504594
chr15	CG	SV	23504009	23504594	59	-	.	ID=876;Type=tandem-duplication;Left=chr15:23497200-23497698;Right=chr15:23504009-23504594
chr16	CG	SV	20150831	20199992	40	.	.	ID=759;Type=tandem-duplication;Left=chr16:20150831-20151282-;Right=chr16:20199406-20199992-;Distance=48710;DiscordantMatePairAlignments=40;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	20150831	20151282	40	-	.	ID=759;Type=tandem-duplication;Left=chr16:20150831-20151282;Right=chr16:20199406-20199992
chr16	CG	SV	20199406	20199992	40	-	.	ID=759;Type=tandem-duplication;Left=chr16:20150831-20151282;Right=chr16:20199406-20199992
chr16	CG	SV	24413171	24633756	22	.	.	ID=758;Type=tandem-duplication;Left=chr16:24413171-24413589-;Right=chr16:24633432-24633756-;Distance=220167;DiscordantMatePairAlignments=22;LeftRepeat=AluJ:SINE:Alu;Self chain;RightRepeat=AluY:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	24413171	24413589	22	-	.	ID=758;Type=tandem-duplication;Left=chr16:24413171-24413589;Right=chr16:24633432-24633756
chr16	CG	SV	24633432	24633756	22	-	.	ID=758;Type=tandem-duplication;Left=chr16:24413171-24413589;Right=chr16:24633432-24633756
chr16	CG	SV	76613600	76838182	41	.	.	ID=747;Type=tandem-duplication;Left=chr16:76613600-76614057-;Right=chr16:76837651-76838182-;Distance=224125;DiscordantMatePairAlignments=41;LeftRepeat=;RightRepeat=;LeftGenes=NM_005752:+;RightGenes=NM_016373:+;NM_130791:+;XRef=;Frequency=0.00
chr16	CG	SV	76613600	76614057	41	-	.	ID=747;Type=tandem-duplication;Left=chr16:76613600-76614057;Right=chr16:76837651-76838182
chr16	CG	SV	76837651	76838182	41	-	.	ID=747;Type=tandem-duplication;Left=chr16:76613600-76614057;Right=chr16:76837651-76838182
chr17	CG	SV	37065098	37344668	82	.	.	ID=742;Type=tandem-duplication;Left=chr17:37065098-37065806-;Right=chr17:37344361-37344668-;Distance=278862;DiscordantMatePairAlignments=82;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_031421:+;XRef=;Frequency=0.00
chr17	CG	SV	37065098	37065806	82	-	.	ID=742;Type=tandem-duplication;Left=chr17:37065098-37065806;Right=chr17:37344361-37344668
chr17	CG	SV	37344361	37344668	82	-	.	ID=742;Type=tandem-duplication;Left=chr17:37065098-37065806;Right=chr17:37344361-37344668
chr17	CG	SV	46220485	46415520	40	.	.	ID=740;Type=tandem-duplication;Left=chr17:46220485-46221059-;Right=chr17:46415029-46415520-;Distance=194461;DiscordantMatePairAlignments=40;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=;RightGenes=NM_001130528:-;NM_003971:-;XRef=;Frequency=0.00
chr17	CG	SV	46220485	46221059	40	-	.	ID=740;Type=tandem-duplication;Left=chr17:46220485-46221059;Right=chr17:46415029-46415520
chr17	CG	SV	46415029	46415520	40	-	.	ID=740;Type=tandem-duplication;Left=chr17:46220485-46221059;Right=chr17:46415029-46415520
chr17	CG	SV	55235541	55386414	17	.	.	ID=739;Type=tandem-duplication;Left=chr17:55235541-55236003-;Right=chr17:55385957-55386414-;Distance=150411;DiscordantMatePairAlignments=17;LeftRepeat=Self chain;RightRepeat=SegDup;Self chain;LeftGenes=NM_030938:+;RightGenes=NM_016125:-;XRef=;Frequency=0.00
chr17	CG	SV	55235541	55236003	17	-	.	ID=739;Type=tandem-duplication;Left=chr17:55235541-55236003;Right=chr17:55385957-55386414
chr17	CG	SV	55385957	55386414	17	-	.	ID=739;Type=tandem-duplication;Left=chr17:55235541-55236003;Right=chr17:55385957-55386414
chr18	CG	SV	31924384	31927552	33	.	.	ID=1720;Type=deletion;Left=chr18:31924384-31924697+;Right=chr18:31927139-31927552+;Distance=2755;DiscordantMatePairAlignments=33;LeftRepeat=AluSx:SINE:Alu;RightRepeat=MER90a:LTR:ERV1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	31924384	31924697	33	+	.	ID=1720;Type=deletion;Left=chr18:31924384-31924697;Right=chr18:31927139-31927552
chr18	CG	SV	31927139	31927552	33	+	.	ID=1720;Type=deletion;Left=chr18:31924384-31924697;Right=chr18:31927139-31927552
chr18	CG	SV	53340479	53511875	19	.	.	ID=681;Type=tandem-duplication;Left=chr18:53340479-53340890-;Right=chr18:53511375-53511875-;Distance=170985;DiscordantMatePairAlignments=19;LeftRepeat=MLT1J2:LTR:MaLR;SegDup;Self chain;RightRepeat=AluSq:SINE:Alu;LeftGenes=;RightGenes=NM_005603:-;XRef=;Frequency=0.00
chr18	CG	SV	53340479	53340890	19	-	.	ID=681;Type=tandem-duplication;Left=chr18:53340479-53340890;Right=chr18:53511375-53511875
chr18	CG	SV	53511375	53511875	19	-	.	ID=681;Type=tandem-duplication;Left=chr18:53340479-53340890;Right=chr18:53511375-53511875
chr19	CG	SV	2058518	2200476	53	.	.	ID=673;Type=tandem-duplication;Left=chr19:2058518-2058995-;Right=chr19:2199882-2200476-;Distance=141481;DiscordantMatePairAlignments=53;LeftRepeat=L1MD:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001077523:-;NM_003938:-;RightGenes=NM_000479:+;XRef=;Frequency=0.00
chr19	CG	SV	2058518	2058995	53	-	.	ID=673;Type=tandem-duplication;Left=chr19:2058518-2058995;Right=chr19:2199882-2200476
chr19	CG	SV	2199882	2200476	53	-	.	ID=673;Type=tandem-duplication;Left=chr19:2058518-2058995;Right=chr19:2199882-2200476
chr19	CG	SV	18851156	19064661	121	.	.	ID=668;Type=tandem-duplication;Left=chr19:18851156-18851627-;Right=chr19:19064023-19064661-;Distance=213034;DiscordantMatePairAlignments=121;LeftRepeat=Self chain;Tandem period 63;RightRepeat=Self chain;LeftGenes=NM_001492:-;NM_021267:-;NM_198207:-;RightGenes=NM_178526:+;XRef=;Frequency=0.00
chr19	CG	SV	18851156	18851627	121	-	.	ID=668;Type=tandem-duplication;Left=chr19:18851156-18851627;Right=chr19:19064023-19064661
chr19	CG	SV	19064023	19064661	121	-	.	ID=668;Type=tandem-duplication;Left=chr19:18851156-18851627;Right=chr19:19064023-19064661
chr19	CG	SV	18873916	18877584	14	.	.	ID=1676;Type=deletion;Left=chr19:18873916-18874389+;Right=chr19:18877332-18877584+;Distance=3416;DiscordantMatePairAlignments=14;LeftRepeat=AluY:SINE:Alu;Self chain;RightRepeat=Self chain;Tandem period 15;LeftGenes=NM_007263:-;NM_199442:-;NM_199444:-;RightGenes=NM_007263:-;NM_199442:-;NM_199444:-;XRef=;Frequency=0.00
chr19	CG	SV	18873916	18874389	14	+	.	ID=1676;Type=deletion;Left=chr19:18873916-18874389;Right=chr19:18877332-18877584
chr19	CG	SV	18877332	18877584	14	+	.	ID=1676;Type=deletion;Left=chr19:18873916-18874389;Right=chr19:18877332-18877584
chr19	CG	SV	36444443	36758282	35	.	.	ID=640;Type=tandem-duplication;Left=chr19:36444443-36444847-;Right=chr19:36757930-36758282-;Distance=313435;DiscordantMatePairAlignments=35;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	36444443	36444847	35	-	.	ID=640;Type=tandem-duplication;Left=chr19:36444443-36444847;Right=chr19:36757930-36758282
chr19	CG	SV	36757930	36758282	35	-	.	ID=640;Type=tandem-duplication;Left=chr19:36444443-36444847;Right=chr19:36757930-36758282
chr19	CG	SV	52115277	52115514	25	-	.	ID=587;Type=interchromosomal;Left=chr19:52115277-52115514-;Right=chrX:133781007-133781474-;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=Self chain;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_004491:+;RightGenes=NM_138819:+;XRef=;Frequency=0.00
chrX	CG	SV	133781007	133781474	25	-	.	ID=587;Type=interchromosomal;Left=chr19:52115277-52115514-;Right=chrX:133781007-133781474-;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=Self chain;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_004491:+;RightGenes=NM_138819:+;XRef=;Frequency=0.00
chr19	CG	SV	60605633	60606067	37	-	.	ID=29;Type=complex;Left=chr19:60605633-60606067-;Right=chr21:33998225-33998688+;Distance=;DiscordantMatePairAlignments=37;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_014501:-;RightGenes=NM_001001132:+;NM_003024:+;XRef=;Frequency=0.00
chr21	CG	SV	33998225	33998688	37	-	.	ID=29;Type=complex;Left=chr19:60605633-60606067-;Right=chr21:33998225-33998688+;Distance=;DiscordantMatePairAlignments=37;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_014501:-;RightGenes=NM_001001132:+;NM_003024:+;XRef=;Frequency=0.00
chr19	CG	SV	62078040	62105475	11	.	.	ID=633;Type=tandem-duplication;Left=chr19:62078040-62078571-;Right=chr19:62105188-62105475-;Distance=26904;DiscordantMatePairAlignments=11;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	62078040	62078571	11	-	.	ID=633;Type=tandem-duplication;Left=chr19:62078040-62078571;Right=chr19:62105188-62105475
chr19	CG	SV	62105188	62105475	11	-	.	ID=633;Type=tandem-duplication;Left=chr19:62078040-62078571;Right=chr19:62105188-62105475
chr20	CG	SV	14711393	14829671	25	.	.	ID=1629;Type=deletion;Left=chr20:14711393-14711933+;Right=chr20:14829307-14829671+;Distance=117914;DiscordantMatePairAlignments=25;LeftRepeat=LTR16A:LTR:ERVL;RightRepeat=L1M4:LINE:L1;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	14711393	14711933	25	+	.	ID=1629;Type=deletion;Left=chr20:14711393-14711933;Right=chr20:14829307-14829671
chr20	CG	SV	14829307	14829671	25	+	.	ID=1629;Type=deletion;Left=chr20:14711393-14711933;Right=chr20:14829307-14829671
chr20	CG	SV	14864688	14895829	21	.	.	ID=1628;Type=deletion;Left=chr20:14864688-14865241+;Right=chr20:14895387-14895829+;Distance=30699;DiscordantMatePairAlignments=21;LeftRepeat=L2:LINE:L2;RightRepeat=L1ME3:LINE:L1;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	14864688	14865241	21	+	.	ID=1628;Type=deletion;Left=chr20:14864688-14865241;Right=chr20:14895387-14895829
chr20	CG	SV	14895387	14895829	21	+	.	ID=1628;Type=deletion;Left=chr20:14864688-14865241;Right=chr20:14895387-14895829
chr20	CG	SV	61981505	61982367	11	.	.	ID=1579;Type=deletion;Left=chr20:61981505-61981789+;Right=chr20:61982265-61982367+;Distance=760;DiscordantMatePairAlignments=11;LeftRepeat=Self chain;Tandem period 40;RightRepeat=Self chain;Tandem period 40;LeftGenes=NM_003288:+;NM_199359:+;NM_199360:+;NM_199361:+;NM_199362:+;NM_199363:+;RightGenes=NM_003288:+;NM_199359:+;NM_199360:+;NM_199361:+;NM_199362:+;NM_199363:+;XRef=;Frequency=0.10
chr20	CG	SV	61981505	61981789	11	+	.	ID=1579;Type=deletion;Left=chr20:61981505-61981789;Right=chr20:61982265-61982367
chr20	CG	SV	61982265	61982367	11	+	.	ID=1579;Type=deletion;Left=chr20:61981505-61981789;Right=chr20:61982265-61982367
chrX	CG	SV	112995078	113013072	44	.	.	ID=10;Type=probable-inversion;Left=chrX:112995078-112995499-;Right=chrX:113012571-113013072+;Distance=17072;DiscordantMatePairAlignments=44;LeftRepeat=L1ME1:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	112995078	112995499	44	-	.	ID=10;Type=probable-inversion;Left=chrX:112995078-112995499;Right=chrX:113012571-113013072
chrX	CG	SV	113012571	113013072	44	-	.	ID=10;Type=probable-inversion;Left=chrX:112995078-112995499;Right=chrX:113012571-113013072
chrX	CG	SV	117905654	117908314	29	.	.	ID=1460;Type=deletion;Left=chrX:117905654-117906165+;Right=chrX:117907917-117908314+;Distance=2263;DiscordantMatePairAlignments=29;LeftRepeat=HERVP71A:LTR:ERV1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	117905654	117906165	29	+	.	ID=1460;Type=deletion;Left=chrX:117905654-117906165;Right=chrX:117907917-117908314
chrX	CG	SV	117907917	117908314	29	+	.	ID=1460;Type=deletion;Left=chrX:117905654-117906165;Right=chrX:117907917-117908314