chr1	CG	SV	10482363	10484374	10	.	.	ID=4630;Type=deletion;Left=chr1:10482363-10482776+;Right=chr1:10484217-10484374+;Distance=1854;DiscordantMatePairAlignments=10;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_004565:+;RightGenes=NM_004565:+;XRef=;Frequency=0.00
chr1	CG	SV	10482363	10482776	10	+	.	ID=4630;Type=deletion;Left=chr1:10482363-10482776;Right=chr1:10484217-10484374
chr1	CG	SV	10484217	10484374	10	+	.	ID=4630;Type=deletion;Left=chr1:10482363-10482776;Right=chr1:10484217-10484374
chr1	CG	SV	15422313	25363088	78	.	.	ID=862;Type=probable-inversion;Left=chr1:15422313-15422806-;Right=chr1:25362531-25363088+;Distance=9939725;DiscordantMatePairAlignments=78;LeftRepeat=AluSq:SINE:Alu;Self chain;RightRepeat=AluJ/FLAM:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	15422313	15422806	78	-	.	ID=862;Type=probable-inversion;Left=chr1:15422313-15422806;Right=chr1:25362531-25363088
chr1	CG	SV	25362531	25363088	78	-	.	ID=862;Type=probable-inversion;Left=chr1:15422313-15422806;Right=chr1:25362531-25363088
chr1	CG	SV	15616806	25365520	48	.	.	ID=4913;Type=probable-inversion;Left=chr1:15616806-15617262+;Right=chr1:25365079-25365520-;Distance=9748714;DiscordantMatePairAlignments=48;LeftRepeat=Self chain;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_024329:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	15616806	15617262	48	+	.	ID=4913;Type=probable-inversion;Left=chr1:15616806-15617262;Right=chr1:25365079-25365520
chr1	CG	SV	25365079	25365520	48	+	.	ID=4913;Type=probable-inversion;Left=chr1:15616806-15617262;Right=chr1:25365079-25365520
chr1	CG	SV	27997056	27997266	23	-	.	ID=584;Type=interchromosomal;Left=chr1:27997056-27997266-;Right=chr20:58911843-58912498+;Distance=;DiscordantMatePairAlignments=23;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=NM_177424:+;RightGenes=;XRef=;Frequency=0.00
chr20	CG	SV	58911843	58912498	23	-	.	ID=584;Type=interchromosomal;Left=chr1:27997056-27997266-;Right=chr20:58911843-58912498+;Distance=;DiscordantMatePairAlignments=23;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=NM_177424:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	148200908	148201319	60	+	.	ID=4864;Type=interchromosomal;Left=chr1:148200908-148201319+;Right=chr5:1616038-1616581-;Distance=;DiscordantMatePairAlignments=60;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_020205:-;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	1616038	1616581	60	+	.	ID=4864;Type=interchromosomal;Left=chr1:148200908-148201319+;Right=chr5:1616038-1616581-;Distance=;DiscordantMatePairAlignments=60;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_020205:-;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	7014439	7017907	89	.	.	ID=3994;Type=deletion;Left=chr2:7014439-7014947+;Right=chr2:7017433-7017907+;Distance=2994;DiscordantMatePairAlignments=89;LeftRepeat=;RightRepeat=MSTC:LTR:MaLR;LeftGenes=NM_014746:+;RightGenes=NM_014746:+;XRef=;Frequency=0.00
chr2	CG	SV	7014439	7014947	89	+	.	ID=3994;Type=deletion;Left=chr2:7014439-7014947;Right=chr2:7017433-7017907
chr2	CG	SV	7017433	7017907	89	+	.	ID=3994;Type=deletion;Left=chr2:7014439-7014947;Right=chr2:7017433-7017907
chr2	CG	SV	14595272	14687963	49	.	.	ID=3990;Type=deletion;Left=chr2:14595272-14595742+;Right=chr2:14687503-14687963+;Distance=92231;DiscordantMatePairAlignments=49;LeftRepeat=;RightRepeat=MIR:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	14595272	14595742	49	+	.	ID=3990;Type=deletion;Left=chr2:14595272-14595742;Right=chr2:14687503-14687963
chr2	CG	SV	14687503	14687963	49	+	.	ID=3990;Type=deletion;Left=chr2:14595272-14595742;Right=chr2:14687503-14687963
chr2	CG	SV	17109916	17110039	61	-	.	ID=782;Type=interchromosomal;Left=chr2:17109916-17110039-;Right=chr9:121845640-121846281+;Distance=;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	121845640	121846281	61	-	.	ID=782;Type=interchromosomal;Left=chr2:17109916-17110039-;Right=chr9:121845640-121846281+;Distance=;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	17112030	17113246	14	.	.	ID=4887;Type=probable-inversion;Left=chr2:17112030-17112171+;Right=chr2:17112800-17113246-;Distance=1216;DiscordantMatePairAlignments=14;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	17112030	17112171	14	+	.	ID=4887;Type=probable-inversion;Left=chr2:17112030-17112171;Right=chr2:17112800-17113246
chr2	CG	SV	17112800	17113246	14	+	.	ID=4887;Type=probable-inversion;Left=chr2:17112030-17112171;Right=chr2:17112800-17113246
chr2	CG	SV	79970592	80021758	73	.	.	ID=1850;Type=tandem-duplication;Left=chr2:79970592-79970949-;Right=chr2:80021252-80021758-;Distance=50809;DiscordantMatePairAlignments=73;LeftRepeat=;RightRepeat=;LeftGenes=NM_001164883:+;NM_004389:+;RightGenes=NM_001164883:+;NM_004389:+;XRef=;Frequency=0.00
chr2	CG	SV	79970592	79970949	73	-	.	ID=1850;Type=tandem-duplication;Left=chr2:79970592-79970949;Right=chr2:80021252-80021758
chr2	CG	SV	80021252	80021758	73	-	.	ID=1850;Type=tandem-duplication;Left=chr2:79970592-79970949;Right=chr2:80021252-80021758
chr2	CG	SV	101343610	101347200	28	.	.	ID=3840;Type=deletion;Left=chr2:101343610-101344085+;Right=chr2:101346945-101347200+;Distance=3335;DiscordantMatePairAlignments=28;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=MER20B:DNA:MER1_type;Self chain;LeftGenes=NM_153836:-;RightGenes=NM_153836:-;XRef=;Frequency=0.00
chr2	CG	SV	101343610	101344085	28	+	.	ID=3840;Type=deletion;Left=chr2:101343610-101344085;Right=chr2:101346945-101347200
chr2	CG	SV	101346945	101347200	28	+	.	ID=3840;Type=deletion;Left=chr2:101343610-101344085;Right=chr2:101346945-101347200
chr2	CG	SV	132747167	132747457	331	+	.	ID=4664;Type=interchromosomal;Left=chr2:132747167-132747457+;Right=chr16:33862766-33863532-;Distance=;DiscordantMatePairAlignments=331;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	33862766	33863532	331	+	.	ID=4664;Type=interchromosomal;Left=chr2:132747167-132747457+;Right=chr16:33862766-33863532-;Distance=;DiscordantMatePairAlignments=331;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	184039475	184045815	51	.	.	ID=1761;Type=tandem-duplication;Left=chr2:184039475-184040004-;Right=chr2:184045449-184045815-;Distance=5811;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	184039475	184040004	51	-	.	ID=1761;Type=tandem-duplication;Left=chr2:184039475-184040004;Right=chr2:184045449-184045815
chr2	CG	SV	184045449	184045815	51	-	.	ID=1761;Type=tandem-duplication;Left=chr2:184039475-184040004;Right=chr2:184045449-184045815
chr2	CG	SV	239732680	239749389	67	.	.	ID=4805;Type=probable-inversion;Left=chr2:239732680-239733144+;Right=chr2:239748789-239749389-;Distance=16709;DiscordantMatePairAlignments=67;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_006037:-;RightGenes=NM_006037:-;XRef=;Frequency=0.00
chr2	CG	SV	239732680	239733144	67	+	.	ID=4805;Type=probable-inversion;Left=chr2:239732680-239733144;Right=chr2:239748789-239749389
chr2	CG	SV	239748789	239749389	67	+	.	ID=4805;Type=probable-inversion;Left=chr2:239732680-239733144;Right=chr2:239748789-239749389
chr3	CG	SV	3197768	3557169	53	.	.	ID=1755;Type=tandem-duplication;Left=chr3:3197768-3198211-;Right=chr3:3556654-3557169-;Distance=358958;DiscordantMatePairAlignments=53;LeftRepeat=;RightRepeat=MIR3:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	3197768	3198211	53	-	.	ID=1755;Type=tandem-duplication;Left=chr3:3197768-3198211;Right=chr3:3556654-3557169
chr3	CG	SV	3556654	3557169	53	-	.	ID=1755;Type=tandem-duplication;Left=chr3:3197768-3198211;Right=chr3:3556654-3557169
chr3	CG	SV	31908032	32331754	40	.	.	ID=1753;Type=tandem-duplication;Left=chr3:31908032-31908327-;Right=chr3:32331290-32331754-;Distance=423427;DiscordantMatePairAlignments=40;LeftRepeat=;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_017784:-;RightGenes=NM_178868:+;XRef=;Frequency=0.00
chr3	CG	SV	31908032	31908327	40	-	.	ID=1753;Type=tandem-duplication;Left=chr3:31908032-31908327;Right=chr3:32331290-32331754
chr3	CG	SV	32331290	32331754	40	-	.	ID=1753;Type=tandem-duplication;Left=chr3:31908032-31908327;Right=chr3:32331290-32331754
chr3	CG	SV	169685465	169730430	23	.	.	ID=1736;Type=tandem-duplication;Left=chr3:169685465-169685856-;Right=chr3:169730097-169730430-;Distance=44574;DiscordantMatePairAlignments=23;LeftRepeat=MER104:DNA:Tc2;RightRepeat=THE1C:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	169685465	169685856	23	-	.	ID=1736;Type=tandem-duplication;Left=chr3:169685465-169685856;Right=chr3:169730097-169730430
chr3	CG	SV	169730097	169730430	23	-	.	ID=1736;Type=tandem-duplication;Left=chr3:169685465-169685856;Right=chr3:169730097-169730430
chr3	CG	SV	175552679	175562478	58	.	.	ID=1735;Type=tandem-duplication;Left=chr3:175552679-175553075-;Right=chr3:175562011-175562478-;Distance=9403;DiscordantMatePairAlignments=58;LeftRepeat=L1MC3:LINE:L1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	175552679	175553075	58	-	.	ID=1735;Type=tandem-duplication;Left=chr3:175552679-175553075;Right=chr3:175562011-175562478
chr3	CG	SV	175562011	175562478	58	-	.	ID=1735;Type=tandem-duplication;Left=chr3:175552679-175553075;Right=chr3:175562011-175562478
chr4	CG	SV	185741828	185964707	54	.	.	ID=756;Type=probable-inversion;Left=chr4:185741828-185742332-;Right=chr4:185964343-185964707+;Distance=222011;DiscordantMatePairAlignments=54;LeftRepeat=Self chain;RightRepeat=;LeftGenes=;RightGenes=NM_001995:-;XRef=;Frequency=0.00
chr4	CG	SV	185741828	185742332	54	-	.	ID=756;Type=probable-inversion;Left=chr4:185741828-185742332;Right=chr4:185964343-185964707
chr4	CG	SV	185964343	185964707	54	-	.	ID=756;Type=probable-inversion;Left=chr4:185741828-185742332;Right=chr4:185964343-185964707
chr4	CG	SV	186576504	186577973	30	.	.	ID=3557;Type=deletion;Left=chr4:186576504-186576783+;Right=chr4:186577558-186577973+;Distance=1054;DiscordantMatePairAlignments=30;LeftRepeat=MIR3:SINE:MIR;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_018359:-;NR_028085:-;RightGenes=NM_018359:-;NR_028085:-;XRef=;Frequency=0.00
chr4	CG	SV	186576504	186576783	30	+	.	ID=3557;Type=deletion;Left=chr4:186576504-186576783;Right=chr4:186577558-186577973
chr4	CG	SV	186577558	186577973	30	+	.	ID=3557;Type=deletion;Left=chr4:186576504-186576783;Right=chr4:186577558-186577973
chr4	CG	SV	191179202	191179805	13	-	.	ID=1482;Type=interchromosomal;Left=chr4:191179202-191179805-;Right=chr18:102252-102542-;Distance=;DiscordantMatePairAlignments=13;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	102252	102542	13	-	.	ID=1482;Type=interchromosomal;Left=chr4:191179202-191179805-;Right=chr18:102252-102542-;Distance=;DiscordantMatePairAlignments=13;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	16184703	16230925	64	.	.	ID=1477;Type=tandem-duplication;Left=chr5:16184703-16185352-;Right=chr5:16230497-16230925-;Distance=45573;DiscordantMatePairAlignments=64;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_001102562:-;RightGenes=NM_001102562:-;XRef=;Frequency=0.00
chr5	CG	SV	16184703	16185352	64	-	.	ID=1477;Type=tandem-duplication;Left=chr5:16184703-16185352;Right=chr5:16230497-16230925
chr5	CG	SV	16230497	16230925	64	-	.	ID=1477;Type=tandem-duplication;Left=chr5:16184703-16185352;Right=chr5:16230497-16230925
chr5	CG	SV	24463678	24464762	85	.	.	ID=3331;Type=deletion;Left=chr5:24463678-24464103+;Right=chr5:24464258-24464762+;Distance=580;DiscordantMatePairAlignments=85;LeftRepeat=ERVL-B4:LTR:ERVL;RightRepeat=ERVL-B4:LTR:ERVL;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	24463678	24464103	85	+	.	ID=3331;Type=deletion;Left=chr5:24463678-24464103;Right=chr5:24464258-24464762
chr5	CG	SV	24464258	24464762	85	+	.	ID=3331;Type=deletion;Left=chr5:24463678-24464103;Right=chr5:24464258-24464762
chr5	CG	SV	65539110	65563412	37	.	.	ID=3317;Type=deletion;Left=chr5:65539110-65539726+;Right=chr5:65562909-65563412+;Distance=23799;DiscordantMatePairAlignments=37;LeftRepeat=MER21C:LTR:ERV1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	65539110	65539726	37	+	.	ID=3317;Type=deletion;Left=chr5:65539110-65539726;Right=chr5:65562909-65563412
chr5	CG	SV	65562909	65563412	37	+	.	ID=3317;Type=deletion;Left=chr5:65539110-65539726;Right=chr5:65562909-65563412
chr5	CG	SV	68232893	118321229	12	.	.	ID=393;Type=probable-inversion;Left=chr5:68232893-68233273-;Right=chr5:118320808-118321229+;Distance=50087535;DiscordantMatePairAlignments=12;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_173666:-;XRef=;Frequency=0.00
chr5	CG	SV	68232893	68233273	12	-	.	ID=393;Type=probable-inversion;Left=chr5:68232893-68233273;Right=chr5:118320808-118321229
chr5	CG	SV	118320808	118321229	12	-	.	ID=393;Type=probable-inversion;Left=chr5:68232893-68233273;Right=chr5:118320808-118321229
chr5	CG	SV	93735398	93739207	66	.	.	ID=392;Type=probable-inversion;Left=chr5:93735398-93735869-;Right=chr5:93738713-93739207+;Distance=2844;DiscordantMatePairAlignments=66;LeftRepeat=;RightRepeat=;LeftGenes=NM_001145678:-;RightGenes=NM_001145678:-;XRef=;Frequency=0.00
chr5	CG	SV	93735398	93735869	66	-	.	ID=392;Type=probable-inversion;Left=chr5:93735398-93735869;Right=chr5:93738713-93739207
chr5	CG	SV	93738713	93739207	66	-	.	ID=392;Type=probable-inversion;Left=chr5:93735398-93735869;Right=chr5:93738713-93739207
chr5	CG	SV	104388037	104388466	24	+	.	ID=3222;Type=interchromosomal;Left=chr5:104388037-104388466+;Right=chr10:59071734-59072169+;Distance=;DiscordantMatePairAlignments=24;LeftRepeat=L1MEc:LINE:L1;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	59071734	59072169	24	+	.	ID=3222;Type=interchromosomal;Left=chr5:104388037-104388466+;Right=chr10:59071734-59072169+;Distance=;DiscordantMatePairAlignments=24;LeftRepeat=L1MEc:LINE:L1;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	113075055	128695457	16	.	.	ID=1474;Type=tandem-duplication;Left=chr5:113075055-113075321-;Right=chr5:128695104-128695457-;Distance=15620136;DiscordantMatePairAlignments=16;LeftRepeat=HAL1:LINE:L1;RightRepeat=L1MA2:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	113075055	113075321	16	-	.	ID=1474;Type=tandem-duplication;Left=chr5:113075055-113075321;Right=chr5:128695104-128695457
chr5	CG	SV	128695104	128695457	16	-	.	ID=1474;Type=tandem-duplication;Left=chr5:113075055-113075321;Right=chr5:128695104-128695457
chr5	CG	SV	116210704	163407056	69	.	.	ID=1473;Type=tandem-duplication;Left=chr5:116210704-116211166-;Right=chr5:163406602-163407056-;Distance=47195890;DiscordantMatePairAlignments=69;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	116210704	116211166	69	-	.	ID=1473;Type=tandem-duplication;Left=chr5:116210704-116211166;Right=chr5:163406602-163407056
chr5	CG	SV	163406602	163407056	69	-	.	ID=1473;Type=tandem-duplication;Left=chr5:116210704-116211166;Right=chr5:163406602-163407056
chr5	CG	SV	120253252	120496403	32	.	.	ID=3283;Type=deletion;Left=chr5:120253252-120253809+;Right=chr5:120495940-120496403+;Distance=242688;DiscordantMatePairAlignments=32;LeftRepeat=L1P4:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	120253252	120253809	32	+	.	ID=3283;Type=deletion;Left=chr5:120253252-120253809;Right=chr5:120495940-120496403
chr5	CG	SV	120495940	120496403	32	+	.	ID=3283;Type=deletion;Left=chr5:120253252-120253809;Right=chr5:120495940-120496403
chr5	CG	SV	121952170	121955813	166	.	.	ID=3280;Type=deletion;Left=chr5:121952170-121952721+;Right=chr5:121955333-121955813+;Distance=3163;DiscordantMatePairAlignments=166;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	121952170	121952721	166	+	.	ID=3280;Type=deletion;Left=chr5:121952170-121952721;Right=chr5:121955333-121955813
chr5	CG	SV	121955333	121955813	166	+	.	ID=3280;Type=deletion;Left=chr5:121952170-121952721;Right=chr5:121955333-121955813
chr5	CG	SV	129523564	129917563	45	.	.	ID=3276;Type=deletion;Left=chr5:129523564-129524035+;Right=chr5:129917097-129917563+;Distance=393533;DiscordantMatePairAlignments=45;LeftRepeat=;RightRepeat=MER66C:LTR:ERV1;Self chain;LeftGenes=NM_175856:+;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	129523564	129524035	45	+	.	ID=3276;Type=deletion;Left=chr5:129523564-129524035;Right=chr5:129917097-129917563
chr5	CG	SV	129917097	129917563	45	+	.	ID=3276;Type=deletion;Left=chr5:129523564-129524035;Right=chr5:129917097-129917563
chr5	CG	SV	133458702	179588247	11	.	.	ID=3264;Type=deletion;Left=chr5:133458702-133459095+;Right=chr5:179587691-179588247+;Distance=46128989;DiscordantMatePairAlignments=11;LeftRepeat=MER103:DNA:DNA;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	133458702	133459095	11	+	.	ID=3264;Type=deletion;Left=chr5:133458702-133459095;Right=chr5:179587691-179588247
chr5	CG	SV	179587691	179588247	11	+	.	ID=3264;Type=deletion;Left=chr5:133458702-133459095;Right=chr5:179587691-179588247
chr5	CG	SV	148677662	149858598	36	.	.	ID=386;Type=probable-inversion;Left=chr5:148677662-148678140-;Right=chr5:149858133-149858598+;Distance=1179993;DiscordantMatePairAlignments=36;LeftRepeat=L3:LINE:CR1;RightRepeat=MIR:SINE:MIR;LeftGenes=NM_001146337:+;NM_152406:+;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	148677662	148678140	36	-	.	ID=386;Type=probable-inversion;Left=chr5:148677662-148678140;Right=chr5:149858133-149858598
chr5	CG	SV	149858133	149858598	36	-	.	ID=386;Type=probable-inversion;Left=chr5:148677662-148678140;Right=chr5:149858133-149858598
chr5	CG	SV	156512968	169342197	45	.	.	ID=384;Type=probable-inversion;Left=chr5:156512968-156513349-;Right=chr5:169341706-169342197+;Distance=12828357;DiscordantMatePairAlignments=45;LeftRepeat=L1MD:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=NM_004946:+;XRef=;Frequency=0.00
chr5	CG	SV	156512968	156513349	45	-	.	ID=384;Type=probable-inversion;Left=chr5:156512968-156513349;Right=chr5:169341706-169342197
chr5	CG	SV	169341706	169342197	45	-	.	ID=384;Type=probable-inversion;Left=chr5:156512968-156513349;Right=chr5:169341706-169342197
chr5	CG	SV	156527451	156527857	68	+	.	ID=3038;Type=interchromosomal;Left=chr5:156527451-156527857+;Right=chr10:133957281-133957752+;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_173575:-;XRef=;Frequency=0.00
chr10	CG	SV	133957281	133957752	68	+	.	ID=3038;Type=interchromosomal;Left=chr5:156527451-156527857+;Right=chr10:133957281-133957752+;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_173575:-;XRef=;Frequency=0.00
chr5	CG	SV	165104041	165236820	74	.	.	ID=3259;Type=deletion;Left=chr5:165104041-165104531+;Right=chr5:165236386-165236820+;Distance=132345;DiscordantMatePairAlignments=74;LeftRepeat=Self chain;RightRepeat=L2:LINE:L2;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	165104041	165104531	74	+	.	ID=3259;Type=deletion;Left=chr5:165104041-165104531;Right=chr5:165236386-165236820
chr5	CG	SV	165236386	165236820	74	+	.	ID=3259;Type=deletion;Left=chr5:165104041-165104531;Right=chr5:165236386-165236820
chr5	CG	SV	179718847	179720864	26	.	.	ID=4454;Type=probable-inversion;Left=chr5:179718847-179719160+;Right=chr5:179720460-179720864-;Distance=2017;DiscordantMatePairAlignments=26;LeftRepeat=L2:LINE:L2;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	179718847	179719160	26	+	.	ID=4454;Type=probable-inversion;Left=chr5:179718847-179719160;Right=chr5:179720460-179720864
chr5	CG	SV	179720460	179720864	26	+	.	ID=4454;Type=probable-inversion;Left=chr5:179718847-179719160;Right=chr5:179720460-179720864
chr6	CG	SV	62606288	62609588	47	.	.	ID=1440;Type=tandem-duplication;Left=chr6:62606288-62606676-;Right=chr6:62609285-62609588-;Distance=2912;DiscordantMatePairAlignments=47;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_152688:-;RightGenes=NM_152688:-;XRef=;Frequency=0.00
chr6	CG	SV	62606288	62606676	47	-	.	ID=1440;Type=tandem-duplication;Left=chr6:62606288-62606676;Right=chr6:62609285-62609588
chr6	CG	SV	62609285	62609588	47	-	.	ID=1440;Type=tandem-duplication;Left=chr6:62606288-62606676;Right=chr6:62609285-62609588
chr6	CG	SV	82134807	82147963	44	.	.	ID=377;Type=probable-inversion;Left=chr6:82134807-82135227-;Right=chr6:82147560-82147963+;Distance=12333;DiscordantMatePairAlignments=44;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	82134807	82135227	44	-	.	ID=377;Type=probable-inversion;Left=chr6:82134807-82135227;Right=chr6:82147560-82147963
chr6	CG	SV	82147560	82147963	44	-	.	ID=377;Type=probable-inversion;Left=chr6:82134807-82135227;Right=chr6:82147560-82147963
chr6	CG	SV	101150632	101345173	17	.	.	ID=1434;Type=tandem-duplication;Left=chr6:101150632-101150970-;Right=chr6:101344654-101345173-;Distance=194203;DiscordantMatePairAlignments=17;LeftRepeat=L1M5:LINE:L1;RightRepeat=Self chain;LeftGenes=NM_006828:-;RightGenes=NM_006828:-;XRef=;Frequency=0.00
chr6	CG	SV	101150632	101150970	17	-	.	ID=1434;Type=tandem-duplication;Left=chr6:101150632-101150970;Right=chr6:101344654-101345173
chr6	CG	SV	101344654	101345173	17	-	.	ID=1434;Type=tandem-duplication;Left=chr6:101150632-101150970;Right=chr6:101344654-101345173
chr6	CG	SV	143290869	143296334	30	.	.	ID=375;Type=probable-inversion;Left=chr6:143290869-143291260-;Right=chr6:143295957-143296334+;Distance=4697;DiscordantMatePairAlignments=30;LeftRepeat=;RightRepeat=;LeftGenes=NM_006734:-;RightGenes=NM_006734:-;XRef=;Frequency=0.00
chr6	CG	SV	143290869	143291260	30	-	.	ID=375;Type=probable-inversion;Left=chr6:143290869-143291260;Right=chr6:143295957-143296334
chr6	CG	SV	143295957	143296334	30	-	.	ID=375;Type=probable-inversion;Left=chr6:143290869-143291260;Right=chr6:143295957-143296334
chr7	CG	SV	71283978	71374368	15	.	.	ID=1407;Type=tandem-duplication;Left=chr7:71283978-71284485-;Right=chr7:71374159-71374368-;Distance=89883;DiscordantMatePairAlignments=15;LeftRepeat=AluSg:SINE:Alu;Self chain;RightRepeat=FRAM:SINE:Alu;Self chain;LeftGenes=NM_001017440:-;NM_031468:-;RightGenes=NM_001017440:-;NM_031468:-;XRef=;Frequency=0.00
chr7	CG	SV	71283978	71284485	15	-	.	ID=1407;Type=tandem-duplication;Left=chr7:71283978-71284485;Right=chr7:71374159-71374368
chr7	CG	SV	71374159	71374368	15	-	.	ID=1407;Type=tandem-duplication;Left=chr7:71283978-71284485;Right=chr7:71374159-71374368
chr7	CG	SV	132648602	132648851	10	-	.	ID=1137;Type=interchromosomal;Left=chr7:132648602-132648851-;Right=chr19:48238372-48238737-;Distance=;DiscordantMatePairAlignments=10;LeftRepeat=;RightRepeat=L1MCa:LINE:L1;SegDup;Self chain;LeftGenes=NM_001037126:+;NM_021807:+;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	48238372	48238737	10	-	.	ID=1137;Type=interchromosomal;Left=chr7:132648602-132648851-;Right=chr19:48238372-48238737-;Distance=;DiscordantMatePairAlignments=10;LeftRepeat=;RightRepeat=L1MCa:LINE:L1;SegDup;Self chain;LeftGenes=NM_001037126:+;NM_021807:+;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	151795880	151796679	21	.	.	ID=3009;Type=deletion;Left=chr7:151795880-151796373+;Right=chr7:151796549-151796679+;Distance=669;DiscordantMatePairAlignments=21;LeftRepeat=Self chain;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	151795880	151796373	21	+	.	ID=3009;Type=deletion;Left=chr7:151795880-151796373;Right=chr7:151796549-151796679
chr7	CG	SV	151796549	151796679	21	+	.	ID=3009;Type=deletion;Left=chr7:151795880-151796373;Right=chr7:151796549-151796679
chr8	CG	SV	8764151	8766562	68	.	.	ID=2980;Type=deletion;Left=chr8:8764151-8764652+;Right=chr8:8766092-8766562+;Distance=1941;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_004225:-;RightGenes=NM_004225:-;XRef=;Frequency=0.00
chr8	CG	SV	8764151	8764652	68	+	.	ID=2980;Type=deletion;Left=chr8:8764151-8764652;Right=chr8:8766092-8766562
chr8	CG	SV	8766092	8766562	68	+	.	ID=2980;Type=deletion;Left=chr8:8764151-8764652;Right=chr8:8766092-8766562
chr8	CG	SV	90909091	90914794	39	.	.	ID=4409;Type=complex;Left=chr8:90909091-90909413+;Right=chr8:90914421-90914794-;Distance=5703;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	90909091	90909413	39	+	.	ID=4409;Type=complex;Left=chr8:90909091-90909413;Right=chr8:90914421-90914794
chr8	CG	SV	90914421	90914794	39	+	.	ID=4409;Type=complex;Left=chr8:90909091-90909413;Right=chr8:90914421-90914794
chr8	CG	SV	90914794	91965148	18	.	.	ID=2939;Type=complex;Left=chr8:90914794-90915173+;Right=chr8:91965062-91965148+;Distance=1050268;DiscordantMatePairAlignments=18;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_022351:+;XRef=;Frequency=0.00
chr8	CG	SV	90914794	90915173	18	+	.	ID=2939;Type=complex;Left=chr8:90914794-90915173;Right=chr8:91965062-91965148
chr8	CG	SV	91965062	91965148	18	+	.	ID=2939;Type=complex;Left=chr8:90914794-90915173;Right=chr8:91965062-91965148
chr8	CG	SV	94209883	94212275	85	.	.	ID=2937;Type=complex;Left=chr8:94209883-94210339+;Right=chr8:94211891-94212275+;Distance=2008;DiscordantMatePairAlignments=85;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	94209883	94210339	85	+	.	ID=2937;Type=complex;Left=chr8:94209883-94210339;Right=chr8:94211891-94212275
chr8	CG	SV	94211891	94212275	85	+	.	ID=2937;Type=complex;Left=chr8:94209883-94210339;Right=chr8:94211891-94212275
chr8	CG	SV	94211774	94212776	62	.	.	ID=4407;Type=complex;Left=chr8:94211774-94212305+;Right=chr8:94212346-94212776-;Distance=1002;DiscordantMatePairAlignments=62;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	94211774	94212305	62	+	.	ID=4407;Type=complex;Left=chr8:94211774-94212305;Right=chr8:94212346-94212776
chr8	CG	SV	94212346	94212776	62	+	.	ID=4407;Type=complex;Left=chr8:94211774-94212305;Right=chr8:94212346-94212776
chr8	CG	SV	136784699	136787585	93	.	.	ID=1365;Type=tandem-duplication;Left=chr8:136784699-136785168-;Right=chr8:136787120-136787585-;Distance=2417;DiscordantMatePairAlignments=93;LeftRepeat=L1MEd:LINE:L1;RightRepeat=MLT2E:LTR:ERVL;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	136784699	136785168	93	-	.	ID=1365;Type=tandem-duplication;Left=chr8:136784699-136785168;Right=chr8:136787120-136787585
chr8	CG	SV	136787120	136787585	93	-	.	ID=1365;Type=tandem-duplication;Left=chr8:136784699-136785168;Right=chr8:136787120-136787585
chr9	CG	SV	121829943	121849385	40	.	.	ID=4396;Type=probable-inversion;Left=chr9:121829943-121830254+;Right=chr9:121848893-121849385-;Distance=19442;DiscordantMatePairAlignments=40;LeftRepeat=;RightRepeat=Tigger3b:DNA:MER2_type;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	121829943	121830254	40	+	.	ID=4396;Type=probable-inversion;Left=chr9:121829943-121830254;Right=chr9:121848893-121849385
chr9	CG	SV	121848893	121849385	40	+	.	ID=4396;Type=probable-inversion;Left=chr9:121829943-121830254;Right=chr9:121848893-121849385
chr9	CG	SV	122527192	123058804	34	.	.	ID=1349;Type=tandem-duplication;Left=chr9:122527192-122527431-;Right=chr9:123058379-123058804-;Distance=531373;DiscordantMatePairAlignments=34;LeftRepeat=;RightRepeat=AluSq:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	122527192	122527431	34	-	.	ID=1349;Type=tandem-duplication;Left=chr9:122527192-122527431;Right=chr9:123058379-123058804
chr9	CG	SV	123058379	123058804	34	-	.	ID=1349;Type=tandem-duplication;Left=chr9:122527192-122527431;Right=chr9:123058379-123058804
chr9	CG	SV	122733488	122775193	44	.	.	ID=4395;Type=distal-duplication;Left=chr9:122733488-122733900+;Right=chr9:122774723-122775193-;Distance=41705;DiscordantMatePairAlignments=44;LeftRepeat=Self chain;RightRepeat=(TTTAA)n:Simple_repeat:Simple_repeat;LeftGenes=;RightGenes=NM_001735:-;XRef=;Frequency=0.00
chr9	CG	SV	122733488	122733900	44	+	.	ID=4395;Type=distal-duplication;Left=chr9:122733488-122733900;Right=chr9:122774723-122775193
chr9	CG	SV	122774723	122775193	44	+	.	ID=4395;Type=distal-duplication;Left=chr9:122733488-122733900;Right=chr9:122774723-122775193
chr9	CG	SV	122733802	122743573	86	.	.	ID=317;Type=distal-duplication;Left=chr9:122733802-122734331-;Right=chr9:122743021-122743573+;Distance=8690;DiscordantMatePairAlignments=86;LeftRepeat=;RightRepeat=MLT1C:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	122733802	122734331	86	-	.	ID=317;Type=distal-duplication;Left=chr9:122733802-122734331;Right=chr9:122743021-122743573
chr9	CG	SV	122743021	122743573	86	-	.	ID=317;Type=distal-duplication;Left=chr9:122733802-122734331;Right=chr9:122743021-122743573
chr9	CG	SV	134378734	134379060	45	-	.	ID=1243;Type=interchromosomal;Left=chr9:134378734-134379060-;Right=chr13:31015557-31015963-;Distance=;DiscordantMatePairAlignments=45;LeftRepeat=;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_207417:+;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	31015557	31015963	45	-	.	ID=1243;Type=interchromosomal;Left=chr9:134378734-134379060-;Right=chr13:31015557-31015963-;Distance=;DiscordantMatePairAlignments=45;LeftRepeat=;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_207417:+;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	140032287	140034005	11	.	.	ID=2822;Type=deletion;Left=chr9:140032287-140032572+;Right=chr9:140033878-140034005+;Distance=1591;DiscordantMatePairAlignments=11;LeftRepeat=Self chain;Tandem period 37;RightRepeat=Self chain;LeftGenes=NM_000718:+;RightGenes=NM_000718:+;XRef=;Frequency=0.06
chr9	CG	SV	140032287	140032572	11	+	.	ID=2822;Type=deletion;Left=chr9:140032287-140032572;Right=chr9:140033878-140034005
chr9	CG	SV	140033878	140034005	11	+	.	ID=2822;Type=deletion;Left=chr9:140032287-140032572;Right=chr9:140033878-140034005
chr10	CG	SV	5854594	5854695	10	+	.	ID=2334;Type=interchromosomal;Left=chr10:5854594-5854695+;Right=chr16:33858444-33858817+;Distance=;DiscordantMatePairAlignments=10;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=NM_001115156:-;NM_001494:-;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	33858444	33858817	10	+	.	ID=2334;Type=interchromosomal;Left=chr10:5854594-5854695+;Right=chr16:33858444-33858817+;Distance=;DiscordantMatePairAlignments=10;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=NM_001115156:-;NM_001494:-;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	27482950	61185993	46	.	.	ID=311;Type=probable-inversion;Left=chr10:27482950-27483457-;Right=chr10:61185535-61185993+;Distance=33702078;DiscordantMatePairAlignments=46;LeftRepeat=Self chain;RightRepeat=MLT1C:LTR:MaLR;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	27482950	27483457	46	-	.	ID=311;Type=probable-inversion;Left=chr10:27482950-27483457;Right=chr10:61185535-61185993
chr10	CG	SV	61185535	61185993	46	-	.	ID=311;Type=probable-inversion;Left=chr10:27482950-27483457;Right=chr10:61185535-61185993
chr10	CG	SV	59943899	72057756	25	.	.	ID=4375;Type=complex;Left=chr10:59943899-59944363+;Right=chr10:72057373-72057756-;Distance=12113857;DiscordantMatePairAlignments=25;LeftRepeat=Self chain;RightRepeat=L1MB7:LINE:L1;Self chain;LeftGenes=NM_001080512:+;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	59943899	59944363	25	+	.	ID=4375;Type=complex;Left=chr10:59943899-59944363;Right=chr10:72057373-72057756
chr10	CG	SV	72057373	72057756	25	+	.	ID=4375;Type=complex;Left=chr10:59943899-59944363;Right=chr10:72057373-72057756
chr10	CG	SV	62860591	72058324	24	.	.	ID=2759;Type=complex;Left=chr10:62860591-62860911+;Right=chr10:72057866-72058324+;Distance=9197275;DiscordantMatePairAlignments=24;LeftRepeat=L1MC1:LINE:L1;Self chain;RightRepeat=L1MB7:LINE:L1;Self chain;LeftGenes=NM_178505:-;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	62860591	62860911	24	+	.	ID=2759;Type=complex;Left=chr10:62860591-62860911;Right=chr10:72057866-72058324
chr10	CG	SV	72057866	72058324	24	+	.	ID=2759;Type=complex;Left=chr10:62860591-62860911;Right=chr10:72057866-72058324
chr10	CG	SV	63508026	63508237	19	.	.	ID=4374;Type=probable-inversion;Left=chr10:63508026-63508580+;Right=chr10:63508019-63508237-;Distance=211;DiscordantMatePairAlignments=19;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=Self chain;LeftGenes=NM_032199:+;RightGenes=NM_032199:+;XRef=;Frequency=0.00
chr10	CG	SV	63508026	63508580	19	+	.	ID=4374;Type=probable-inversion;Left=chr10:63508026-63508580;Right=chr10:63508019-63508237
chr10	CG	SV	63508019	63508237	19	+	.	ID=4374;Type=probable-inversion;Left=chr10:63508026-63508580;Right=chr10:63508019-63508237
chr10	CG	SV	75474370	75755110	12	.	.	ID=2757;Type=deletion;Left=chr10:75474370-75474710+;Right=chr10:75754722-75755110+;Distance=280352;DiscordantMatePairAlignments=12;LeftRepeat=L1ME3B:LINE:L1;Self chain;RightRepeat=L1MA6:LINE:L1;Self chain;LeftGenes=NM_003373:+;NM_014000:+;RightGenes=NM_001123:+;NM_006721:+;XRef=;Frequency=0.00
chr10	CG	SV	75474370	75474710	12	+	.	ID=2757;Type=deletion;Left=chr10:75474370-75474710;Right=chr10:75754722-75755110
chr10	CG	SV	75754722	75755110	12	+	.	ID=2757;Type=deletion;Left=chr10:75474370-75474710;Right=chr10:75754722-75755110
chr10	CG	SV	78863313	78886302	75	.	.	ID=1298;Type=tandem-duplication;Left=chr10:78863313-78863822-;Right=chr10:78885742-78886302-;Distance=22480;DiscordantMatePairAlignments=75;LeftRepeat=Self chain;RightRepeat=L2:LINE:L2;Self chain;LeftGenes=NM_001014797:-;NM_001161352:-;NM_001161353:-;NM_002247:-;RightGenes=NM_001014797:-;NM_001161352:-;NM_001161353:-;NM_002247:-;XRef=;Frequency=0.00
chr10	CG	SV	78863313	78863822	75	-	.	ID=1298;Type=tandem-duplication;Left=chr10:78863313-78863822;Right=chr10:78885742-78886302
chr10	CG	SV	78885742	78886302	75	-	.	ID=1298;Type=tandem-duplication;Left=chr10:78863313-78863822;Right=chr10:78885742-78886302
chr10	CG	SV	84422076	84623914	24	.	.	ID=2751;Type=deletion;Left=chr10:84422076-84422598+;Right=chr10:84623549-84623914+;Distance=201473;DiscordantMatePairAlignments=24;LeftRepeat=L2:LINE:L2;Self chain;RightRepeat=Self chain;LeftGenes=NM_001010848:+;NM_001165972:+;NM_001165973:+;RightGenes=NM_001010848:+;NM_001165972:+;NM_001165973:+;XRef=;Frequency=0.00
chr10	CG	SV	84422076	84422598	24	+	.	ID=2751;Type=deletion;Left=chr10:84422076-84422598;Right=chr10:84623549-84623914
chr10	CG	SV	84623549	84623914	24	+	.	ID=2751;Type=deletion;Left=chr10:84422076-84422598;Right=chr10:84623549-84623914
chr10	CG	SV	84424587	84631678	63	.	.	ID=4371;Type=probable-inversion;Left=chr10:84424587-84425031+;Right=chr10:84631207-84631678-;Distance=207091;DiscordantMatePairAlignments=63;LeftRepeat=LTR8A:LTR:ERV1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001010848:+;NM_001165972:+;NM_001165973:+;RightGenes=NM_001010848:+;NM_001165972:+;NM_001165973:+;XRef=;Frequency=0.00
chr10	CG	SV	84424587	84425031	63	+	.	ID=4371;Type=probable-inversion;Left=chr10:84424587-84425031;Right=chr10:84631207-84631678
chr10	CG	SV	84631207	84631678	63	+	.	ID=4371;Type=probable-inversion;Left=chr10:84424587-84425031;Right=chr10:84631207-84631678
chr11	CG	SV	19708432	19714625	59	.	.	ID=2701;Type=deletion;Left=chr11:19708432-19708950+;Right=chr11:19714181-19714625+;Distance=5749;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=;LeftGenes=NM_001111018:+;NM_145117:+;NM_182964:+;RightGenes=NM_001111018:+;NM_145117:+;NM_182964:+;XRef=;Frequency=0.00
chr11	CG	SV	19708432	19708950	59	+	.	ID=2701;Type=deletion;Left=chr11:19708432-19708950;Right=chr11:19714181-19714625
chr11	CG	SV	19714181	19714625	59	+	.	ID=2701;Type=deletion;Left=chr11:19708432-19708950;Right=chr11:19714181-19714625
chr11	CG	SV	30392942	30410818	35	.	.	ID=1282;Type=tandem-duplication;Left=chr11:30392942-30393285-;Right=chr11:30410395-30410818-;Distance=17533;DiscordantMatePairAlignments=35;LeftRepeat=;RightRepeat=;LeftGenes=NM_001145399:-;NM_001584:-;RightGenes=NM_001145399:-;NM_001584:-;XRef=;Frequency=0.00
chr11	CG	SV	30392942	30393285	35	-	.	ID=1282;Type=tandem-duplication;Left=chr11:30392942-30393285;Right=chr11:30410395-30410818
chr11	CG	SV	30410395	30410818	35	-	.	ID=1282;Type=tandem-duplication;Left=chr11:30392942-30393285;Right=chr11:30410395-30410818
chr11	CG	SV	84129166	84258079	42	.	.	ID=1268;Type=tandem-duplication;Left=chr11:84129166-84129465-;Right=chr11:84257689-84258079-;Distance=128614;DiscordantMatePairAlignments=42;LeftRepeat=L1M2c:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001142699:-;NM_001364:-;RightGenes=NM_001142699:-;NM_001364:-;XRef=;Frequency=0.00
chr11	CG	SV	84129166	84129465	42	-	.	ID=1268;Type=tandem-duplication;Left=chr11:84129166-84129465;Right=chr11:84257689-84258079
chr11	CG	SV	84257689	84258079	42	-	.	ID=1268;Type=tandem-duplication;Left=chr11:84129166-84129465;Right=chr11:84257689-84258079
chr11	CG	SV	122515772	122737894	80	.	.	ID=1257;Type=tandem-duplication;Left=chr11:122515772-122516385-;Right=chr11:122737422-122737894-;Distance=221509;DiscordantMatePairAlignments=80;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_024769:-;RightGenes=;XRef=;Frequency=0.00
chr11	CG	SV	122515772	122516385	80	-	.	ID=1257;Type=tandem-duplication;Left=chr11:122515772-122516385;Right=chr11:122737422-122737894
chr11	CG	SV	122737422	122737894	80	-	.	ID=1257;Type=tandem-duplication;Left=chr11:122515772-122516385;Right=chr11:122737422-122737894
chr12	CG	SV	6718000	6719171	17	.	.	ID=2616;Type=deletion;Left=chr12:6718000-6718413+;Right=chr12:6718785-6719171+;Distance=785;DiscordantMatePairAlignments=17;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	6718000	6718413	17	+	.	ID=2616;Type=deletion;Left=chr12:6718000-6718413;Right=chr12:6718785-6719171
chr12	CG	SV	6718785	6719171	17	+	.	ID=2616;Type=deletion;Left=chr12:6718000-6718413;Right=chr12:6718785-6719171
chr13	CG	SV	30094958	30096279	115	.	.	ID=2523;Type=deletion;Left=chr13:30094958-30095439+;Right=chr13:30095770-30096279+;Distance=812;DiscordantMatePairAlignments=115;LeftRepeat=;RightRepeat=MER21B:LTR:ERV1;LeftGenes=NM_005800:+;RightGenes=NM_005800:+;XRef=;Frequency=0.00
chr13	CG	SV	30094958	30095439	115	+	.	ID=2523;Type=deletion;Left=chr13:30094958-30095439;Right=chr13:30095770-30096279
chr13	CG	SV	30095770	30096279	115	+	.	ID=2523;Type=deletion;Left=chr13:30094958-30095439;Right=chr13:30095770-30096279
chr13	CG	SV	68813467	68816017	11	.	.	ID=2504;Type=deletion;Left=chr13:68813467-68813809+;Right=chr13:68815641-68816017+;Distance=2174;DiscordantMatePairAlignments=11;LeftRepeat=L1M1:LINE:L1;RightRepeat=L1M1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	68813467	68813809	11	+	.	ID=2504;Type=deletion;Left=chr13:68813467-68813809;Right=chr13:68815641-68816017
chr13	CG	SV	68815641	68816017	11	+	.	ID=2504;Type=deletion;Left=chr13:68813467-68813809;Right=chr13:68815641-68816017
chr15	CG	SV	22884267	22885644	10	.	.	ID=2427;Type=deletion;Left=chr15:22884267-22884807+;Right=chr15:22885409-22885644+;Distance=1142;DiscordantMatePairAlignments=10;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.06
chr15	CG	SV	22884267	22884807	10	+	.	ID=2427;Type=deletion;Left=chr15:22884267-22884807;Right=chr15:22885409-22885644
chr15	CG	SV	22885409	22885644	10	+	.	ID=2427;Type=deletion;Left=chr15:22884267-22884807;Right=chr15:22885409-22885644
chr15	CG	SV	23497292	23504598	58	.	.	ID=1208;Type=tandem-duplication;Left=chr15:23497292-23497702-;Right=chr15:23504115-23504598-;Distance=6896;DiscordantMatePairAlignments=58;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_024490:-;RightGenes=NM_024490:-;XRef=;Frequency=0.00
chr15	CG	SV	23497292	23497702	58	-	.	ID=1208;Type=tandem-duplication;Left=chr15:23497292-23497702;Right=chr15:23504115-23504598
chr15	CG	SV	23504115	23504598	58	-	.	ID=1208;Type=tandem-duplication;Left=chr15:23497292-23497702;Right=chr15:23504115-23504598
chr15	CG	SV	23538188	23542711	33	.	.	ID=1207;Type=tandem-duplication;Left=chr15:23538188-23538771-;Right=chr15:23542414-23542711-;Distance=3940;DiscordantMatePairAlignments=33;LeftRepeat=Self chain;RightRepeat=L1MEd:LINE:L1;Self chain;LeftGenes=NM_024490:-;RightGenes=NM_024490:-;XRef=;Frequency=0.00
chr15	CG	SV	23538188	23538771	33	-	.	ID=1207;Type=tandem-duplication;Left=chr15:23538188-23538771;Right=chr15:23542414-23542711
chr15	CG	SV	23542414	23542711	33	-	.	ID=1207;Type=tandem-duplication;Left=chr15:23538188-23538771;Right=chr15:23542414-23542711
chr16	CG	SV	20150828	20199992	47	.	.	ID=1195;Type=tandem-duplication;Left=chr16:20150828-20151282-;Right=chr16:20199575-20199992-;Distance=48710;DiscordantMatePairAlignments=47;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	20150828	20151282	47	-	.	ID=1195;Type=tandem-duplication;Left=chr16:20150828-20151282;Right=chr16:20199575-20199992
chr16	CG	SV	20199575	20199992	47	-	.	ID=1195;Type=tandem-duplication;Left=chr16:20150828-20151282;Right=chr16:20199575-20199992
chr16	CG	SV	24413139	24633741	14	.	.	ID=1194;Type=tandem-duplication;Left=chr16:24413139-24413574-;Right=chr16:24633527-24633741-;Distance=220167;DiscordantMatePairAlignments=14;LeftRepeat=AluJ:SINE:Alu;Self chain;RightRepeat=AluY:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	24413139	24413574	14	-	.	ID=1194;Type=tandem-duplication;Left=chr16:24413139-24413574;Right=chr16:24633527-24633741
chr16	CG	SV	24633527	24633741	14	-	.	ID=1194;Type=tandem-duplication;Left=chr16:24413139-24413574;Right=chr16:24633527-24633741
chr16	CG	SV	76613575	76838182	93	.	.	ID=1043;Type=tandem-duplication;Left=chr16:76613575-76614057-;Right=chr16:76837715-76838182-;Distance=224125;DiscordantMatePairAlignments=93;LeftRepeat=;RightRepeat=;LeftGenes=NM_005752:+;RightGenes=NM_016373:+;NM_130791:+;XRef=;Frequency=0.00
chr16	CG	SV	76613575	76614057	93	-	.	ID=1043;Type=tandem-duplication;Left=chr16:76613575-76614057;Right=chr16:76837715-76838182
chr16	CG	SV	76837715	76838182	93	-	.	ID=1043;Type=tandem-duplication;Left=chr16:76613575-76614057;Right=chr16:76837715-76838182
chr17	CG	SV	37065316	37344668	88	.	.	ID=1035;Type=tandem-duplication;Left=chr17:37065316-37065806-;Right=chr17:37344403-37344668-;Distance=278862;DiscordantMatePairAlignments=88;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=NM_031421:+;XRef=;Frequency=0.00
chr17	CG	SV	37065316	37065806	88	-	.	ID=1035;Type=tandem-duplication;Left=chr17:37065316-37065806;Right=chr17:37344403-37344668
chr17	CG	SV	37344403	37344668	88	-	.	ID=1035;Type=tandem-duplication;Left=chr17:37065316-37065806;Right=chr17:37344403-37344668
chr17	CG	SV	55235659	55386414	12	.	.	ID=1033;Type=tandem-duplication;Left=chr17:55235659-55236003-;Right=chr17:55386043-55386414-;Distance=150411;DiscordantMatePairAlignments=12;LeftRepeat=Self chain;RightRepeat=SegDup;Self chain;LeftGenes=NM_030938:+;RightGenes=NM_016125:-;XRef=;Frequency=0.00
chr17	CG	SV	55235659	55236003	12	-	.	ID=1033;Type=tandem-duplication;Left=chr17:55235659-55236003;Right=chr17:55386043-55386414
chr17	CG	SV	55386043	55386414	12	-	.	ID=1033;Type=tandem-duplication;Left=chr17:55235659-55236003;Right=chr17:55386043-55386414
chr18	CG	SV	98927	101622	28	.	.	ID=2102;Type=deletion;Left=chr18:98927-99406+;Right=chr18:101079-101622+;Distance=2152;DiscordantMatePairAlignments=28;LeftRepeat=BSR/Beta:Satellite:Satellite;SegDup;Self chain;Tandem period 68;RightRepeat=BSR/Beta:Satellite:Satellite;SegDup;Self chain;Tandem period 68;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	98927	99406	28	+	.	ID=2102;Type=deletion;Left=chr18:98927-99406;Right=chr18:101079-101622
chr18	CG	SV	101079	101622	28	+	.	ID=2102;Type=deletion;Left=chr18:98927-99406;Right=chr18:101079-101622
chr18	CG	SV	31924384	31927560	41	.	.	ID=2077;Type=deletion;Left=chr18:31924384-31924710+;Right=chr18:31927139-31927560+;Distance=2755;DiscordantMatePairAlignments=41;LeftRepeat=AluSx:SINE:Alu;RightRepeat=MER90a:LTR:ERV1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	31924384	31924710	41	+	.	ID=2077;Type=deletion;Left=chr18:31924384-31924710;Right=chr18:31927139-31927560
chr18	CG	SV	31927139	31927560	41	+	.	ID=2077;Type=deletion;Left=chr18:31924384-31924710;Right=chr18:31927139-31927560
chr18	CG	SV	53340647	53511875	11	.	.	ID=961;Type=tandem-duplication;Left=chr18:53340647-53340890-;Right=chr18:53511397-53511875-;Distance=170985;DiscordantMatePairAlignments=11;LeftRepeat=MLT1J2:LTR:MaLR;SegDup;Self chain;RightRepeat=AluSq:SINE:Alu;LeftGenes=;RightGenes=NM_005603:-;XRef=;Frequency=0.00
chr18	CG	SV	53340647	53340890	11	-	.	ID=961;Type=tandem-duplication;Left=chr18:53340647-53340890;Right=chr18:53511397-53511875
chr18	CG	SV	53511397	53511875	11	-	.	ID=961;Type=tandem-duplication;Left=chr18:53340647-53340890;Right=chr18:53511397-53511875
chr19	CG	SV	2058596	2200476	79	.	.	ID=951;Type=tandem-duplication;Left=chr19:2058596-2058995-;Right=chr19:2199966-2200476-;Distance=141481;DiscordantMatePairAlignments=79;LeftRepeat=L1MD:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001077523:-;NM_003938:-;RightGenes=NM_000479:+;XRef=;Frequency=0.00
chr19	CG	SV	2058596	2058995	79	-	.	ID=951;Type=tandem-duplication;Left=chr19:2058596-2058995;Right=chr19:2199966-2200476
chr19	CG	SV	2199966	2200476	79	-	.	ID=951;Type=tandem-duplication;Left=chr19:2058596-2058995;Right=chr19:2199966-2200476
chr19	CG	SV	36444436	36758282	49	.	.	ID=919;Type=tandem-duplication;Left=chr19:36444436-36444847-;Right=chr19:36757880-36758282-;Distance=313435;DiscordantMatePairAlignments=49;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	36444436	36444847	49	-	.	ID=919;Type=tandem-duplication;Left=chr19:36444436-36444847;Right=chr19:36757880-36758282
chr19	CG	SV	36757880	36758282	49	-	.	ID=919;Type=tandem-duplication;Left=chr19:36444436-36444847;Right=chr19:36757880-36758282
chr20	CG	SV	14547213	14811810	70	.	.	ID=1973;Type=deletion;Left=chr20:14547213-14547758+;Right=chr20:14811306-14811810+;Distance=264093;DiscordantMatePairAlignments=70;LeftRepeat=;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	14547213	14547758	70	+	.	ID=1973;Type=deletion;Left=chr20:14547213-14547758;Right=chr20:14811306-14811810
chr20	CG	SV	14811306	14811810	70	+	.	ID=1973;Type=deletion;Left=chr20:14547213-14547758;Right=chr20:14811306-14811810
chr20	CG	SV	61981503	61982419	21	.	.	ID=1918;Type=deletion;Left=chr20:61981503-61981906+;Right=chr20:61982263-61982419+;Distance=760;DiscordantMatePairAlignments=21;LeftRepeat=Self chain;Tandem period 40;RightRepeat=Self chain;Tandem period 40;LeftGenes=NM_003288:+;NM_199359:+;NM_199360:+;NM_199361:+;NM_199362:+;NM_199363:+;RightGenes=NM_003288:+;NM_199359:+;NM_199360:+;NM_199361:+;NM_199362:+;NM_199363:+;XRef=;Frequency=0.10
chr20	CG	SV	61981503	61981906	21	+	.	ID=1918;Type=deletion;Left=chr20:61981503-61981906;Right=chr20:61982263-61982419
chr20	CG	SV	61982263	61982419	21	+	.	ID=1918;Type=deletion;Left=chr20:61981503-61981906;Right=chr20:61982263-61982419
chrX	CG	SV	7077182	7101139	62	.	.	ID=549;Type=deletion;Left=chrX:7077182-7077584+;Right=chrX:7100680-7101139+;Distance=23498;DiscordantMatePairAlignments=62;LeftRepeat=BC200:scRNA:scRNA;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	7077182	7077584	62	+	.	ID=549;Type=deletion;Left=chrX:7077182-7077584;Right=chrX:7100680-7101139
chrX	CG	SV	7100680	7101139	62	+	.	ID=549;Type=deletion;Left=chrX:7077182-7077584;Right=chrX:7100680-7101139
chrX	CG	SV	93233376	93236814	79	.	.	ID=522;Type=deletion;Left=chrX:93233376-93233825+;Right=chrX:93236393-93236814+;Distance=3017;DiscordantMatePairAlignments=79;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	93233376	93233825	79	+	.	ID=522;Type=deletion;Left=chrX:93233376-93233825;Right=chrX:93236393-93236814
chrX	CG	SV	93236393	93236814	79	+	.	ID=522;Type=deletion;Left=chrX:93233376-93233825;Right=chrX:93236393-93236814
chrX	CG	SV	112995052	113013084	34	.	.	ID=8;Type=probable-inversion;Left=chrX:112995052-112995499-;Right=chrX:113012571-113013084+;Distance=17072;DiscordantMatePairAlignments=34;LeftRepeat=L1ME1:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	112995052	112995499	34	-	.	ID=8;Type=probable-inversion;Left=chrX:112995052-112995499;Right=chrX:113012571-113013084
chrX	CG	SV	113012571	113013084	34	-	.	ID=8;Type=probable-inversion;Left=chrX:112995052-112995499;Right=chrX:113012571-113013084
chrX	CG	SV	117718981	117720467	12	.	.	ID=514;Type=deletion;Left=chrX:117718981-117719479+;Right=chrX:117720311-117720467+;Distance=1330;DiscordantMatePairAlignments=12;LeftRepeat=AluSp:SINE:Alu;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	117718981	117719479	12	+	.	ID=514;Type=deletion;Left=chrX:117718981-117719479;Right=chrX:117720311-117720467
chrX	CG	SV	117720311	117720467	12	+	.	ID=514;Type=deletion;Left=chrX:117718981-117719479;Right=chrX:117720311-117720467