chr1	CG	SV	1604411	1604991	23	+	.	ID=5869;Type=interchromosomal;Left=chr1:1604411-1604991+;Right=chr2:1145894-1146228+;Distance=;DiscordantMatePairAlignments=23;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001110781:-;NM_033486:-;NM_033487:-;NM_033488:-;NM_033489:-;NM_033492:-;NM_033493:-;RightGenes=NM_018968:+;XRef=;Frequency=0.00
chr2	CG	SV	1145894	1146228	23	+	.	ID=5869;Type=interchromosomal;Left=chr1:1604411-1604991+;Right=chr2:1145894-1146228+;Distance=;DiscordantMatePairAlignments=23;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001110781:-;NM_033486:-;NM_033487:-;NM_033488:-;NM_033489:-;NM_033492:-;NM_033493:-;RightGenes=NM_018968:+;XRef=;Frequency=0.00
chr1	CG	SV	10482368	10484480	19	.	.	ID=5913;Type=deletion;Left=chr1:10482368-10482938+;Right=chr1:10484222-10484480+;Distance=1854;DiscordantMatePairAlignments=19;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_004565:+;RightGenes=NM_004565:+;XRef=;Frequency=0.00
chr1	CG	SV	10482368	10482938	19	+	.	ID=5913;Type=deletion;Left=chr1:10482368-10482938;Right=chr1:10484222-10484480
chr1	CG	SV	10484222	10484480	19	+	.	ID=5913;Type=deletion;Left=chr1:10482368-10482938;Right=chr1:10484222-10484480
chr1	CG	SV	27875709	54313247	45	.	.	ID=1825;Type=probable-inversion;Left=chr1:27875709-27876317-;Right=chr1:54312586-54313247+;Distance=26436269;DiscordantMatePairAlignments=45;LeftRepeat=L1PA8:LINE:L1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=NM_153035:+;XRef=;Frequency=0.00
chr1	CG	SV	27875709	27876317	45	-	.	ID=1825;Type=probable-inversion;Left=chr1:27875709-27876317;Right=chr1:54312586-54313247
chr1	CG	SV	54312586	54313247	45	-	.	ID=1825;Type=probable-inversion;Left=chr1:27875709-27876317;Right=chr1:54312586-54313247
chr1	CG	SV	27879335	35285025	12	.	.	ID=1826;Type=probable-inversion;Left=chr1:27879335-27879627-;Right=chr1:35284504-35285025+;Distance=7404877;DiscordantMatePairAlignments=12;LeftRepeat=MLT-int:LTR:MaLR;RightRepeat=AluJo:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	27879335	27879627	12	-	.	ID=1826;Type=probable-inversion;Left=chr1:27879335-27879627;Right=chr1:35284504-35285025
chr1	CG	SV	35284504	35285025	12	-	.	ID=1826;Type=probable-inversion;Left=chr1:27879335-27879627;Right=chr1:35284504-35285025
chr1	CG	SV	33927935	33930399	94	.	.	ID=6213;Type=probable-inversion;Left=chr1:33927935-33928493+;Right=chr1:33929807-33930399-;Distance=2464;DiscordantMatePairAlignments=94;LeftRepeat=L1MC4:LINE:L1;RightRepeat=;LeftGenes=NM_052896:-;RightGenes=NM_052896:-;XRef=;Frequency=0.00
chr1	CG	SV	33927935	33928493	94	+	.	ID=6213;Type=probable-inversion;Left=chr1:33927935-33928493;Right=chr1:33929807-33930399
chr1	CG	SV	33929807	33930399	94	+	.	ID=6213;Type=probable-inversion;Left=chr1:33927935-33928493;Right=chr1:33929807-33930399
chr1	CG	SV	55124018	55126800	154	.	.	ID=5884;Type=deletion;Left=chr1:55124018-55124681+;Right=chr1:55126193-55126800+;Distance=2175;DiscordantMatePairAlignments=154;LeftRepeat=L2:LINE:L2;Self chain;RightRepeat=L2:LINE:L2;LeftGenes=NM_014762:-;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	55124018	55124681	154	+	.	ID=5884;Type=deletion;Left=chr1:55124018-55124681;Right=chr1:55126193-55126800
chr1	CG	SV	55126193	55126800	154	+	.	ID=5884;Type=deletion;Left=chr1:55124018-55124681;Right=chr1:55126193-55126800
chr1	CG	SV	78811603	78812202	67	+	.	ID=6188;Type=interchromosomal;Left=chr1:78811603-78812202+;Right=chr4:20149198-20149767-;Distance=;DiscordantMatePairAlignments=67;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_004787:+;XRef=;Frequency=0.00
chr4	CG	SV	20149198	20149767	67	+	.	ID=6188;Type=interchromosomal;Left=chr1:78811603-78812202+;Right=chr4:20149198-20149767-;Distance=;DiscordantMatePairAlignments=67;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_004787:+;XRef=;Frequency=0.00
chr1	CG	SV	86888450	86939104	59	.	.	ID=2177;Type=tandem-duplication;Left=chr1:86888450-86888933-;Right=chr1:86938484-86939104-;Distance=50171;DiscordantMatePairAlignments=59;LeftRepeat=Self chain;RightRepeat=L1MA8:LINE:L1;LeftGenes=NR_024604:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	86888450	86888933	59	-	.	ID=2177;Type=tandem-duplication;Left=chr1:86888450-86888933;Right=chr1:86938484-86939104
chr1	CG	SV	86938484	86939104	59	-	.	ID=2177;Type=tandem-duplication;Left=chr1:86888450-86888933;Right=chr1:86938484-86939104
chr1	CG	SV	141906695	141907447	12	+	.	ID=5097;Type=interchromosomal;Left=chr1:141906695-141907447+;Right=chr2:11847365-11847496+;Distance=;DiscordantMatePairAlignments=12;LeftRepeat=SegDup;Self chain;RightRepeat=;LeftGenes=;RightGenes=NM_145693:+;XRef=;Frequency=0.00
chr2	CG	SV	11847365	11847496	12	+	.	ID=5097;Type=interchromosomal;Left=chr1:141906695-141907447+;Right=chr2:11847365-11847496+;Distance=;DiscordantMatePairAlignments=12;LeftRepeat=SegDup;Self chain;RightRepeat=;LeftGenes=;RightGenes=NM_145693:+;XRef=;Frequency=0.00
chr1	CG	SV	184030915	185060212	51	.	.	ID=2151;Type=tandem-duplication;Left=chr1:184030915-184031437-;Right=chr1:185059703-185060212-;Distance=1028775;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=;LeftGenes=NM_031935:+;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	184030915	184031437	51	-	.	ID=2151;Type=tandem-duplication;Left=chr1:184030915-184031437;Right=chr1:185059703-185060212
chr1	CG	SV	185059703	185060212	51	-	.	ID=2151;Type=tandem-duplication;Left=chr1:184030915-184031437;Right=chr1:185059703-185060212
chr1	CG	SV	187912364	187921208	74	.	.	ID=2150;Type=tandem-duplication;Left=chr1:187912364-187912877-;Right=chr1:187920747-187921208-;Distance=8331;DiscordantMatePairAlignments=74;LeftRepeat=LTR48B:LTR:ERV1;RightRepeat=MLT1L:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr1	CG	SV	187912364	187912877	74	-	.	ID=2150;Type=tandem-duplication;Left=chr1:187912364-187912877;Right=chr1:187920747-187921208
chr1	CG	SV	187920747	187921208	74	-	.	ID=2150;Type=tandem-duplication;Left=chr1:187912364-187912877;Right=chr1:187920747-187921208
chr1	CG	SV	210557014	210934739	51	.	.	ID=2148;Type=tandem-duplication;Left=chr1:210557014-210557564-;Right=chr1:210934269-210934739-;Distance=377175;DiscordantMatePairAlignments=51;LeftRepeat=Charlie9:DNA:MER1_type;RightRepeat=;LeftGenes=NM_006243:+;RightGenes=NM_018664:-;XRef=;Frequency=0.00
chr1	CG	SV	210557014	210557564	51	-	.	ID=2148;Type=tandem-duplication;Left=chr1:210557014-210557564;Right=chr1:210934269-210934739
chr1	CG	SV	210934269	210934739	51	-	.	ID=2148;Type=tandem-duplication;Left=chr1:210557014-210557564;Right=chr1:210934269-210934739
chr1	CG	SV	243470061	243489819	43	.	.	ID=2145;Type=tandem-duplication;Left=chr1:243470061-243470595-;Right=chr1:243489193-243489819-;Distance=19224;DiscordantMatePairAlignments=43;LeftRepeat=;RightRepeat=AluJb:SINE:Alu;LeftGenes=NM_018012:+;RightGenes=NM_018012:+;XRef=;Frequency=0.00
chr1	CG	SV	243470061	243470595	43	-	.	ID=2145;Type=tandem-duplication;Left=chr1:243470061-243470595;Right=chr1:243489193-243489819
chr1	CG	SV	243489193	243489819	43	-	.	ID=2145;Type=tandem-duplication;Left=chr1:243470061-243470595;Right=chr1:243489193-243489819
chr2	CG	SV	62467753	62471480	22	.	.	ID=919;Type=probable-inversion;Left=chr2:62467753-62468320-;Right=chr2:62471146-62471480+;Distance=2826;DiscordantMatePairAlignments=22;LeftRepeat=AluSq:SINE:Alu;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	62467753	62468320	22	-	.	ID=919;Type=probable-inversion;Left=chr2:62467753-62468320;Right=chr2:62471146-62471480
chr2	CG	SV	62471146	62471480	22	-	.	ID=919;Type=probable-inversion;Left=chr2:62467753-62468320;Right=chr2:62471146-62471480
chr2	CG	SV	116690143	116694898	15	.	.	ID=2044;Type=tandem-duplication;Left=chr2:116690143-116690611-;Right=chr2:116694614-116694898-;Distance=4287;DiscordantMatePairAlignments=15;LeftRepeat=;RightRepeat=L1M4c:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	116690143	116690611	15	-	.	ID=2044;Type=tandem-duplication;Left=chr2:116690143-116690611;Right=chr2:116694614-116694898
chr2	CG	SV	116694614	116694898	15	-	.	ID=2044;Type=tandem-duplication;Left=chr2:116690143-116690611;Right=chr2:116694614-116694898
chr2	CG	SV	132747163	132747594	220	+	.	ID=5636;Type=interchromosomal;Left=chr2:132747163-132747594+;Right=chr16:33862766-33863532-;Distance=;DiscordantMatePairAlignments=220;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	33862766	33863532	220	+	.	ID=5636;Type=interchromosomal;Left=chr2:132747163-132747594+;Right=chr16:33862766-33863532-;Distance=;DiscordantMatePairAlignments=220;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	133856337	134185500	87	.	.	ID=2034;Type=tandem-duplication;Left=chr2:133856337-133856722-;Right=chr2:134184800-134185500-;Distance=328778;DiscordantMatePairAlignments=87;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_207363:-;NM_207481:-;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	133856337	133856722	87	-	.	ID=2034;Type=tandem-duplication;Left=chr2:133856337-133856722;Right=chr2:134184800-134185500
chr2	CG	SV	134184800	134185500	87	-	.	ID=2034;Type=tandem-duplication;Left=chr2:133856337-133856722;Right=chr2:134184800-134185500
chr2	CG	SV	141292311	141307175	43	.	.	ID=4905;Type=deletion;Left=chr2:141292311-141292817+;Right=chr2:141306668-141307175+;Distance=14357;DiscordantMatePairAlignments=43;LeftRepeat=;RightRepeat=L1MA4:LINE:L1;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00
chr2	CG	SV	141292311	141292817	43	+	.	ID=4905;Type=deletion;Left=chr2:141292311-141292817;Right=chr2:141306668-141307175
chr2	CG	SV	141306668	141307175	43	+	.	ID=4905;Type=deletion;Left=chr2:141292311-141292817;Right=chr2:141306668-141307175
chr2	CG	SV	141516602	141791793	93	.	.	ID=4903;Type=complex;Left=chr2:141516602-141517270+;Right=chr2:141791303-141791793+;Distance=274701;DiscordantMatePairAlignments=93;LeftRepeat=LTR40a:LTR:ERVL;RightRepeat=MLT1B:LTR:MaLR;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00
chr2	CG	SV	141516602	141517270	93	+	.	ID=4903;Type=complex;Left=chr2:141516602-141517270;Right=chr2:141791303-141791793
chr2	CG	SV	141791303	141791793	93	+	.	ID=4903;Type=complex;Left=chr2:141516602-141517270;Right=chr2:141791303-141791793
chr2	CG	SV	141516966	141842885	77	.	.	ID=4900;Type=complex;Left=chr2:141516966-141517558+;Right=chr2:141842341-141842885+;Distance=325375;DiscordantMatePairAlignments=77;LeftRepeat=;RightRepeat=;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00
chr2	CG	SV	141516966	141517558	77	+	.	ID=4900;Type=complex;Left=chr2:141516966-141517558;Right=chr2:141842341-141842885
chr2	CG	SV	141842341	141842885	77	+	.	ID=4900;Type=complex;Left=chr2:141516966-141517558;Right=chr2:141842341-141842885
chr2	CG	SV	142095481	142359018	26	.	.	ID=4897;Type=deletion;Left=chr2:142095481-142095956+;Right=chr2:142358008-142359018+;Distance=262527;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00
chr2	CG	SV	142095481	142095956	26	+	.	ID=4897;Type=deletion;Left=chr2:142095481-142095956;Right=chr2:142358008-142359018
chr2	CG	SV	142358008	142359018	26	+	.	ID=4897;Type=deletion;Left=chr2:142095481-142095956;Right=chr2:142358008-142359018
chr2	CG	SV	144043944	144045058	59	.	.	ID=4896;Type=distal-duplication;Left=chr2:144043944-144044470+;Right=chr2:144044480-144045058+;Distance=536;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=;LeftGenes=NM_018460:+;RightGenes=NM_018460:+;XRef=;Frequency=0.00
chr2	CG	SV	144043944	144044470	59	+	.	ID=4896;Type=distal-duplication;Left=chr2:144043944-144044470;Right=chr2:144044480-144045058
chr2	CG	SV	144044480	144045058	59	+	.	ID=4896;Type=distal-duplication;Left=chr2:144043944-144044470;Right=chr2:144044480-144045058
chr2	CG	SV	144043485	144058641	36	.	.	ID=2032;Type=distal-duplication;Left=chr2:144043485-144043948-;Right=chr2:144058068-144058641-;Distance=14693;DiscordantMatePairAlignments=36;LeftRepeat=MIRb:SINE:MIR;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_018460:+;RightGenes=NM_018460:+;XRef=;Frequency=0.00
chr2	CG	SV	144043485	144043948	36	-	.	ID=2032;Type=distal-duplication;Left=chr2:144043485-144043948;Right=chr2:144058068-144058641
chr2	CG	SV	144058068	144058641	36	-	.	ID=2032;Type=distal-duplication;Left=chr2:144043485-144043948;Right=chr2:144058068-144058641
chr2	CG	SV	153753993	153755443	33	.	.	ID=2025;Type=tandem-duplication;Left=chr2:153753993-153754485-;Right=chr2:153754867-153755443-;Distance=958;DiscordantMatePairAlignments=33;LeftRepeat=L1MA4A:LINE:L1;RightRepeat=L1MA4A:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	153753993	153754485	33	-	.	ID=2025;Type=tandem-duplication;Left=chr2:153753993-153754485;Right=chr2:153754867-153755443
chr2	CG	SV	153754867	153755443	33	-	.	ID=2025;Type=tandem-duplication;Left=chr2:153753993-153754485;Right=chr2:153754867-153755443
chr2	CG	SV	184030015	184031410	65	.	.	ID=4864;Type=deletion;Left=chr2:184030015-184030573+;Right=chr2:184030887-184031410+;Distance=872;DiscordantMatePairAlignments=65;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	184030015	184030573	65	+	.	ID=4864;Type=deletion;Left=chr2:184030015-184030573;Right=chr2:184030887-184031410
chr2	CG	SV	184030887	184031410	65	+	.	ID=4864;Type=deletion;Left=chr2:184030015-184030573;Right=chr2:184030887-184031410
chr2	CG	SV	212489917	212536446	75	.	.	ID=4851;Type=deletion;Left=chr2:212489917-212490410+;Right=chr2:212535912-212536446+;Distance=45995;DiscordantMatePairAlignments=75;LeftRepeat=;RightRepeat=;LeftGenes=NM_001042599:-;NM_005235:-;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00
chr2	CG	SV	212489917	212490410	75	+	.	ID=4851;Type=deletion;Left=chr2:212489917-212490410;Right=chr2:212535912-212536446
chr2	CG	SV	212535912	212536446	75	+	.	ID=4851;Type=deletion;Left=chr2:212489917-212490410;Right=chr2:212535912-212536446
chr2	CG	SV	212793182	212933181	54	.	.	ID=4849;Type=deletion;Left=chr2:212793182-212793792+;Right=chr2:212932647-212933181+;Distance=139465;DiscordantMatePairAlignments=54;LeftRepeat=;RightRepeat=;LeftGenes=NM_001042599:-;NM_005235:-;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00
chr2	CG	SV	212793182	212793792	54	+	.	ID=4849;Type=deletion;Left=chr2:212793182-212793792;Right=chr2:212932647-212933181
chr2	CG	SV	212932647	212933181	54	+	.	ID=4849;Type=deletion;Left=chr2:212793182-212793792;Right=chr2:212932647-212933181
chr2	CG	SV	240288764	240311596	62	.	.	ID=2022;Type=tandem-duplication;Left=chr2:240288764-240289311-;Right=chr2:240311185-240311596-;Distance=22285;DiscordantMatePairAlignments=62;LeftRepeat=L1ME3B:LINE:L1;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr2	CG	SV	240288764	240289311	62	-	.	ID=2022;Type=tandem-duplication;Left=chr2:240288764-240289311;Right=chr2:240311185-240311596
chr2	CG	SV	240311185	240311596	62	-	.	ID=2022;Type=tandem-duplication;Left=chr2:240288764-240289311;Right=chr2:240311185-240311596
chr3	CG	SV	2908507	3274706	54	.	.	ID=4816;Type=deletion;Left=chr3:2908507-2909163+;Right=chr3:3274238-3274706+;Distance=365731;DiscordantMatePairAlignments=54;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_175607:+;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	2908507	2909163	54	+	.	ID=4816;Type=deletion;Left=chr3:2908507-2909163;Right=chr3:3274238-3274706
chr3	CG	SV	3274238	3274706	54	+	.	ID=4816;Type=deletion;Left=chr3:2908507-2909163;Right=chr3:3274238-3274706
chr3	CG	SV	8848916	37107563	63	.	.	ID=865;Type=probable-inversion;Left=chr3:8848916-8849562-;Right=chr3:37106868-37107563+;Distance=28257306;DiscordantMatePairAlignments=63;LeftRepeat=AluJb:SINE:Alu;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=NM_001134369:-;NM_006309:-;NM_017724:-;XRef=;Frequency=0.00
chr3	CG	SV	8848916	8849562	63	-	.	ID=865;Type=probable-inversion;Left=chr3:8848916-8849562;Right=chr3:37106868-37107563
chr3	CG	SV	37106868	37107563	63	-	.	ID=865;Type=probable-inversion;Left=chr3:8848916-8849562;Right=chr3:37106868-37107563
chr3	CG	SV	8874930	37199905	74	.	.	ID=6101;Type=probable-inversion;Left=chr3:8874930-8875585+;Right=chr3:37199361-37199905-;Distance=28324975;DiscordantMatePairAlignments=74;LeftRepeat=ERVL-B2:LTR:ERVL;RightRepeat=MLT1K:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	8874930	8875585	74	+	.	ID=6101;Type=probable-inversion;Left=chr3:8874930-8875585;Right=chr3:37199361-37199905
chr3	CG	SV	37199361	37199905	74	+	.	ID=6101;Type=probable-inversion;Left=chr3:8874930-8875585;Right=chr3:37199361-37199905
chr3	CG	SV	30472559	30474195	15	.	.	ID=6096;Type=probable-inversion;Left=chr3:30472559-30473059+;Right=chr3:30474059-30474195-;Distance=1636;DiscordantMatePairAlignments=15;LeftRepeat=MLT1K:LTR:MaLR;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	30472559	30473059	15	+	.	ID=6096;Type=probable-inversion;Left=chr3:30472559-30473059;Right=chr3:30474059-30474195
chr3	CG	SV	30474059	30474195	15	+	.	ID=6096;Type=probable-inversion;Left=chr3:30472559-30473059;Right=chr3:30474059-30474195
chr3	CG	SV	41159179	41203932	126	.	.	ID=2011;Type=tandem-duplication;Left=chr3:41159179-41159818-;Right=chr3:41203420-41203932-;Distance=44114;DiscordantMatePairAlignments=126;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	41159179	41159818	126	-	.	ID=2011;Type=tandem-duplication;Left=chr3:41159179-41159818;Right=chr3:41203420-41203932
chr3	CG	SV	41203420	41203932	126	-	.	ID=2011;Type=tandem-duplication;Left=chr3:41159179-41159818;Right=chr3:41203420-41203932
chr3	CG	SV	59791166	60398725	64	.	.	ID=4748;Type=deletion;Left=chr3:59791166-59791765+;Right=chr3:60398110-60398725+;Distance=606944;DiscordantMatePairAlignments=64;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_001166243:-;NM_002012:-;XRef=;Frequency=0.00
chr3	CG	SV	59791166	59791765	64	+	.	ID=4748;Type=deletion;Left=chr3:59791166-59791765;Right=chr3:60398110-60398725
chr3	CG	SV	60398110	60398725	64	+	.	ID=4748;Type=deletion;Left=chr3:59791166-59791765;Right=chr3:60398110-60398725
chr3	CG	SV	59937929	60127589	104	.	.	ID=2010;Type=tandem-duplication;Left=chr3:59937929-59938455-;Right=chr3:60127006-60127589-;Distance=189134;DiscordantMatePairAlignments=104;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_001166243:-;NM_002012:-;XRef=;Frequency=0.00
chr3	CG	SV	59937929	59938455	104	-	.	ID=2010;Type=tandem-duplication;Left=chr3:59937929-59938455;Right=chr3:60127006-60127589
chr3	CG	SV	60127006	60127589	104	-	.	ID=2010;Type=tandem-duplication;Left=chr3:59937929-59938455;Right=chr3:60127006-60127589
chr3	CG	SV	60883299	60940514	89	.	.	ID=4744;Type=deletion;Left=chr3:60883299-60883977+;Right=chr3:60939556-60940514+;Distance=56257;DiscordantMatePairAlignments=89;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_001166243:-;NM_002012:-;XRef=;Frequency=0.00
chr3	CG	SV	60883299	60883977	89	+	.	ID=4744;Type=deletion;Left=chr3:60883299-60883977;Right=chr3:60939556-60940514
chr3	CG	SV	60939556	60940514	89	+	.	ID=4744;Type=deletion;Left=chr3:60883299-60883977;Right=chr3:60939556-60940514
chr3	CG	SV	76724461	76754050	33	.	.	ID=4731;Type=deletion;Left=chr3:76724461-76725068+;Right=chr3:76753800-76754050+;Distance=29339;DiscordantMatePairAlignments=33;LeftRepeat=MLT1E2:LTR:MaLR;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	76724461	76725068	33	+	.	ID=4731;Type=deletion;Left=chr3:76724461-76725068;Right=chr3:76753800-76754050
chr3	CG	SV	76753800	76754050	33	+	.	ID=4731;Type=deletion;Left=chr3:76724461-76725068;Right=chr3:76753800-76754050
chr3	CG	SV	77322425	77326140	63	.	.	ID=4727;Type=deletion;Left=chr3:77322425-77322965+;Right=chr3:77325575-77326140+;Distance=3150;DiscordantMatePairAlignments=63;LeftRepeat=;RightRepeat=;LeftGenes=NM_001128929:+;NM_002942:+;RightGenes=NM_001128929:+;NM_002942:+;XRef=;Frequency=0.00
chr3	CG	SV	77322425	77322965	63	+	.	ID=4727;Type=deletion;Left=chr3:77322425-77322965;Right=chr3:77325575-77326140
chr3	CG	SV	77325575	77326140	63	+	.	ID=4727;Type=deletion;Left=chr3:77322425-77322965;Right=chr3:77325575-77326140
chr3	CG	SV	84620292	84628664	38	.	.	ID=2004;Type=tandem-duplication;Left=chr3:84620292-84620803-;Right=chr3:84628084-84628664-;Distance=7861;DiscordantMatePairAlignments=38;LeftRepeat=L1MB1:LINE:L1;RightRepeat=L1MC2:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	84620292	84620803	38	-	.	ID=2004;Type=tandem-duplication;Left=chr3:84620292-84620803;Right=chr3:84628084-84628664
chr3	CG	SV	84628084	84628664	38	-	.	ID=2004;Type=tandem-duplication;Left=chr3:84620292-84620803;Right=chr3:84628084-84628664
chr3	CG	SV	85257840	85261144	39	.	.	ID=4722;Type=deletion;Left=chr3:85257840-85258266+;Right=chr3:85260586-85261144+;Distance=2746;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=;LeftGenes=NM_001167674:+;NM_001167675:+;RightGenes=NM_001167674:+;NM_001167675:+;XRef=;Frequency=0.00
chr3	CG	SV	85257840	85258266	39	+	.	ID=4722;Type=deletion;Left=chr3:85257840-85258266;Right=chr3:85260586-85261144
chr3	CG	SV	85260586	85261144	39	+	.	ID=4722;Type=deletion;Left=chr3:85257840-85258266;Right=chr3:85260586-85261144
chr3	CG	SV	98113460	98213706	20	.	.	ID=4718;Type=deletion;Left=chr3:98113460-98113911+;Right=chr3:98213330-98213706+;Distance=99870;DiscordantMatePairAlignments=20;LeftRepeat=;RightRepeat=L1PA16:LINE:L1;Self chain;LeftGenes=NM_001080448:+;RightGenes=NM_001080448:+;XRef=;Frequency=0.00
chr3	CG	SV	98113460	98113911	20	+	.	ID=4718;Type=deletion;Left=chr3:98113460-98113911;Right=chr3:98213330-98213706
chr3	CG	SV	98213330	98213706	20	+	.	ID=4718;Type=deletion;Left=chr3:98113460-98113911;Right=chr3:98213330-98213706
chr3	CG	SV	114280944	114281021	25	-	.	ID=568;Type=complex;Left=chr3:114280944-114281021-;Right=chr16:87318514-87319224+;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=NM_001142864:-;XRef=;Frequency=0.00
chr16	CG	SV	87318514	87319224	25	-	.	ID=568;Type=complex;Left=chr3:114280944-114281021-;Right=chr16:87318514-87319224+;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=NM_001142864:-;XRef=;Frequency=0.00
chr3	CG	SV	114281099	114473354	19	.	.	ID=6088;Type=complex;Left=chr3:114281099-114281180+;Right=chr3:114472746-114473354-;Distance=192255;DiscordantMatePairAlignments=19;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_033254:+;XRef=;Frequency=0.00
chr3	CG	SV	114281099	114281180	19	+	.	ID=6088;Type=complex;Left=chr3:114281099-114281180;Right=chr3:114472746-114473354
chr3	CG	SV	114472746	114473354	19	+	.	ID=6088;Type=complex;Left=chr3:114281099-114281180;Right=chr3:114472746-114473354
chr3	CG	SV	114280591	114473750	111	.	.	ID=851;Type=complex;Left=chr3:114280591-114281108-;Right=chr3:114473371-114473750+;Distance=192263;DiscordantMatePairAlignments=111;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_033254:+;XRef=;Frequency=0.00
chr3	CG	SV	114280591	114281108	111	-	.	ID=851;Type=complex;Left=chr3:114280591-114281108;Right=chr3:114473371-114473750
chr3	CG	SV	114473371	114473750	111	-	.	ID=851;Type=complex;Left=chr3:114280591-114281108;Right=chr3:114473371-114473750
chr3	CG	SV	114473362	114473833	61	+	.	ID=4346;Type=complex;Left=chr3:114473362-114473833+;Right=chr16:87318511-87319065+;Distance=;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=NM_033254:+;RightGenes=NM_001142864:-;XRef=;Frequency=0.00
chr16	CG	SV	87318511	87319065	61	+	.	ID=4346;Type=complex;Left=chr3:114473362-114473833+;Right=chr16:87318511-87319065+;Distance=;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=NM_033254:+;RightGenes=NM_001142864:-;XRef=;Frequency=0.00
chr3	CG	SV	115578945	115585571	13	.	.	ID=850;Type=complex;Left=chr3:115578945-115579032-;Right=chr3:115584975-115585571+;Distance=5943;DiscordantMatePairAlignments=13;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;RightGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;XRef=;Frequency=0.00
chr3	CG	SV	115578945	115579032	13	-	.	ID=850;Type=complex;Left=chr3:115578945-115579032;Right=chr3:115584975-115585571
chr3	CG	SV	115584975	115585571	13	-	.	ID=850;Type=complex;Left=chr3:115578945-115579032;Right=chr3:115584975-115585571
chr3	CG	SV	115579124	115582247	16	.	.	ID=6087;Type=complex;Left=chr3:115579124-115579205+;Right=chr3:115581488-115582247-;Distance=3123;DiscordantMatePairAlignments=16;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;RightGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;XRef=;Frequency=0.00
chr3	CG	SV	115579124	115579205	16	+	.	ID=6087;Type=complex;Left=chr3:115579124-115579205;Right=chr3:115581488-115582247
chr3	CG	SV	115581488	115582247	16	+	.	ID=6087;Type=complex;Left=chr3:115579124-115579205;Right=chr3:115581488-115582247
chr3	CG	SV	115582255	115585464	104	.	.	ID=4703;Type=complex;Left=chr3:115582255-115583008+;Right=chr3:115584973-115585464+;Distance=2718;DiscordantMatePairAlignments=104;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;RightGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;XRef=;Frequency=0.00
chr3	CG	SV	115582255	115583008	104	+	.	ID=4703;Type=complex;Left=chr3:115582255-115583008;Right=chr3:115584973-115585464
chr3	CG	SV	115584973	115585464	104	+	.	ID=4703;Type=complex;Left=chr3:115582255-115583008;Right=chr3:115584973-115585464
chr3	CG	SV	117837589	117931958	92	.	.	ID=4699;Type=deletion;Left=chr3:117837589-117838070+;Right=chr3:117931363-117931958+;Distance=93774;DiscordantMatePairAlignments=92;LeftRepeat=MER20:DNA:MER1_type;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	117837589	117838070	92	+	.	ID=4699;Type=deletion;Left=chr3:117837589-117838070;Right=chr3:117931363-117931958
chr3	CG	SV	117931363	117931958	92	+	.	ID=4699;Type=deletion;Left=chr3:117837589-117838070;Right=chr3:117931363-117931958
chr3	CG	SV	117955761	117997098	74	.	.	ID=4698;Type=deletion;Left=chr3:117955761-117956319+;Right=chr3:117996544-117997098+;Distance=40783;DiscordantMatePairAlignments=74;LeftRepeat=L2:LINE:L2;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	117955761	117956319	74	+	.	ID=4698;Type=deletion;Left=chr3:117955761-117956319;Right=chr3:117996544-117997098
chr3	CG	SV	117996544	117997098	74	+	.	ID=4698;Type=deletion;Left=chr3:117955761-117956319;Right=chr3:117996544-117997098
chr3	CG	SV	118128716	118278392	13	.	.	ID=4696;Type=deletion;Left=chr3:118128716-118129227+;Right=chr3:118277792-118278392+;Distance=149076;DiscordantMatePairAlignments=13;LeftRepeat=L1PA7:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	118128716	118129227	13	+	.	ID=4696;Type=deletion;Left=chr3:118128716-118129227;Right=chr3:118277792-118278392
chr3	CG	SV	118277792	118278392	13	+	.	ID=4696;Type=deletion;Left=chr3:118128716-118129227;Right=chr3:118277792-118278392
chr3	CG	SV	143846756	145059367	59	.	.	ID=2000;Type=tandem-duplication;Left=chr3:143846756-143847257-;Right=chr3:145058906-145059367-;Distance=1212110;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=L1PB2:LINE:L1;LeftGenes=NM_001145319:+;NM_002670:+;RightGenes=;XRef=;Frequency=0.00
chr3	CG	SV	143846756	143847257	59	-	.	ID=2000;Type=tandem-duplication;Left=chr3:143846756-143847257;Right=chr3:145058906-145059367
chr3	CG	SV	145058906	145059367	59	-	.	ID=2000;Type=tandem-duplication;Left=chr3:143846756-143847257;Right=chr3:145058906-145059367
chr3	CG	SV	175385771	175474457	76	.	.	ID=1998;Type=tandem-duplication;Left=chr3:175385771-175386386-;Right=chr3:175473784-175474457-;Distance=88071;DiscordantMatePairAlignments=76;LeftRepeat=;RightRepeat=;LeftGenes=NM_014932:+;RightGenes=NM_014932:+;XRef=;Frequency=0.00
chr3	CG	SV	175385771	175386386	76	-	.	ID=1998;Type=tandem-duplication;Left=chr3:175385771-175386386;Right=chr3:175473784-175474457
chr3	CG	SV	175473784	175474457	76	-	.	ID=1998;Type=tandem-duplication;Left=chr3:175385771-175386386;Right=chr3:175473784-175474457
chr3	CG	SV	186998780	186999263	17	-	.	ID=1759;Type=interchromosomal;Left=chr3:186998780-186999263-;Right=chr12:73463413-73463942-;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=;LeftGenes=NM_001007225:-;NM_006548:-;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	73463413	73463942	17	-	.	ID=1759;Type=interchromosomal;Left=chr3:186998780-186999263-;Right=chr12:73463413-73463942-;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=;LeftGenes=NM_001007225:-;NM_006548:-;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	89613	95923	55	.	.	ID=843;Type=probable-inversion;Left=chr4:89613-90294-;Right=chr4:95430-95923+;Distance=5136;DiscordantMatePairAlignments=55;LeftRepeat=MER61C-int:LTR:ERV1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001039127:+;RightGenes=NM_001039127:+;XRef=;Frequency=0.00
chr4	CG	SV	89613	90294	55	-	.	ID=843;Type=probable-inversion;Left=chr4:89613-90294;Right=chr4:95430-95923
chr4	CG	SV	95430	95923	55	-	.	ID=843;Type=probable-inversion;Left=chr4:89613-90294;Right=chr4:95430-95923
chr4	CG	SV	33957965	33974006	33	.	.	ID=4614;Type=deletion;Left=chr4:33957965-33958505+;Right=chr4:33973536-33974006+;Distance=15571;DiscordantMatePairAlignments=33;LeftRepeat=L1PBa:LINE:L1;RightRepeat=AluSc:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	33957965	33958505	33	+	.	ID=4614;Type=deletion;Left=chr4:33957965-33958505;Right=chr4:33973536-33974006
chr4	CG	SV	33973536	33974006	33	+	.	ID=4614;Type=deletion;Left=chr4:33957965-33958505;Right=chr4:33973536-33974006
chr4	CG	SV	41302912	181820093	54	.	.	ID=1980;Type=tandem-duplication;Left=chr4:41302912-41303589-;Right=chr4:181819648-181820093-;Distance=140516504;DiscordantMatePairAlignments=54;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=NM_001112717:+;NM_001112718:+;NM_014988:+;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	41302912	41303589	54	-	.	ID=1980;Type=tandem-duplication;Left=chr4:41302912-41303589;Right=chr4:181819648-181820093
chr4	CG	SV	181819648	181820093	54	-	.	ID=1980;Type=tandem-duplication;Left=chr4:41302912-41303589;Right=chr4:181819648-181820093
chr4	CG	SV	43151963	127741229	98	.	.	ID=838;Type=probable-inversion;Left=chr4:43151963-43152461-;Right=chr4:127740545-127741229+;Distance=84588084;DiscordantMatePairAlignments=98;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	43151963	43152461	98	-	.	ID=838;Type=probable-inversion;Left=chr4:43151963-43152461;Right=chr4:127740545-127741229
chr4	CG	SV	127740545	127741229	98	-	.	ID=838;Type=probable-inversion;Left=chr4:43151963-43152461;Right=chr4:127740545-127741229
chr4	CG	SV	43407539	43970988	34	.	.	ID=1992;Type=tandem-duplication;Left=chr4:43407539-43408033-;Right=chr4:43970651-43970988-;Distance=562955;DiscordantMatePairAlignments=34;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=NM_198353:-;XRef=;Frequency=0.00
chr4	CG	SV	43407539	43408033	34	-	.	ID=1992;Type=tandem-duplication;Left=chr4:43407539-43408033;Right=chr4:43970651-43970988
chr4	CG	SV	43970651	43970988	34	-	.	ID=1992;Type=tandem-duplication;Left=chr4:43407539-43408033;Right=chr4:43970651-43970988
chr4	CG	SV	43559026	43559437	24	+	.	ID=4545;Type=interchromosomal;Left=chr4:43559026-43559437+;Right=chr5:163279472-163279935+;Distance=;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=MLT-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	163279472	163279935	24	+	.	ID=4545;Type=interchromosomal;Left=chr4:43559026-43559437+;Right=chr5:163279472-163279935+;Distance=;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=MLT-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	87936587	87992097	62	.	.	ID=1983;Type=tandem-duplication;Left=chr4:87936587-87936887-;Right=chr4:87991523-87992097-;Distance=55210;DiscordantMatePairAlignments=62;LeftRepeat=;RightRepeat=;LeftGenes=NM_006264:+;NM_080683:+;NM_080684:+;NM_080685:+;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	87936587	87936887	62	-	.	ID=1983;Type=tandem-duplication;Left=chr4:87936587-87936887;Right=chr4:87991523-87992097
chr4	CG	SV	87991523	87992097	62	-	.	ID=1983;Type=tandem-duplication;Left=chr4:87936587-87936887;Right=chr4:87991523-87992097
chr4	CG	SV	91978522	92025527	23	.	.	ID=4586;Type=deletion;Left=chr4:91978522-91978981+;Right=chr4:92025038-92025527+;Distance=46516;DiscordantMatePairAlignments=23;LeftRepeat=;RightRepeat=L2:LINE:L2;LeftGenes=NM_001145065:+;RightGenes=NM_001145065:+;XRef=;Frequency=0.00
chr4	CG	SV	91978522	91978981	23	+	.	ID=4586;Type=deletion;Left=chr4:91978522-91978981;Right=chr4:92025038-92025527
chr4	CG	SV	92025038	92025527	23	+	.	ID=4586;Type=deletion;Left=chr4:91978522-91978981;Right=chr4:92025038-92025527
chr4	CG	SV	108101479	108102137	136	-	.	ID=530;Type=complex;Left=chr4:108101479-108102137-;Right=chr22:27395610-27396123+;Distance=;DiscordantMatePairAlignments=136;LeftRepeat=;RightRepeat=;LeftGenes=NM_014421:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr22	CG	SV	27395610	27396123	136	-	.	ID=530;Type=complex;Left=chr4:108101479-108102137-;Right=chr22:27395610-27396123+;Distance=;DiscordantMatePairAlignments=136;LeftRepeat=;RightRepeat=;LeftGenes=NM_014421:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr4	CG	SV	123348281	123351466	127	.	.	ID=4564;Type=deletion;Left=chr4:123348281-123348903+;Right=chr4:123350932-123351466+;Distance=2651;DiscordantMatePairAlignments=127;LeftRepeat=;RightRepeat=;LeftGenes=NM_015312:+;RightGenes=NM_015312:+;XRef=;Frequency=0.00
chr4	CG	SV	123348281	123348903	127	+	.	ID=4564;Type=deletion;Left=chr4:123348281-123348903;Right=chr4:123350932-123351466
chr4	CG	SV	123350932	123351466	127	+	.	ID=4564;Type=deletion;Left=chr4:123348281-123348903;Right=chr4:123350932-123351466
chr4	CG	SV	137282833	137283452	51	-	.	ID=831;Type=interchromosomal;Left=chr4:137282833-137283452-;Right=chr6:32978878-32979412+;Distance=;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	32978878	32979412	51	-	.	ID=831;Type=interchromosomal;Left=chr4:137282833-137283452-;Right=chr6:32978878-32979412+;Distance=;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	172645648	172649137	18	.	.	ID=1692;Type=tandem-duplication;Left=chr4:172645648-172646047-;Right=chr4:172648699-172649137-;Distance=3090;DiscordantMatePairAlignments=18;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	172645648	172646047	18	-	.	ID=1692;Type=tandem-duplication;Left=chr4:172645648-172646047;Right=chr4:172648699-172649137
chr4	CG	SV	172648699	172649137	18	-	.	ID=1692;Type=tandem-duplication;Left=chr4:172645648-172646047;Right=chr4:172648699-172649137
chr4	CG	SV	180317574	180348908	60	.	.	ID=1690;Type=tandem-duplication;Left=chr4:180317574-180318145-;Right=chr4:180348356-180348908-;Distance=30763;DiscordantMatePairAlignments=60;LeftRepeat=L1M4:LINE:L1;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	180317574	180318145	60	-	.	ID=1690;Type=tandem-duplication;Left=chr4:180317574-180318145;Right=chr4:180348356-180348908
chr4	CG	SV	180348356	180348908	60	-	.	ID=1690;Type=tandem-duplication;Left=chr4:180317574-180318145;Right=chr4:180348356-180348908
chr4	CG	SV	191129525	191129916	11	-	.	ID=522;Type=interchromosomal;Left=chr4:191129525-191129916-;Right=chr9:67915726-67916093+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=SVA:Other:Other;Self chain;RightRepeat=LTR53:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	67915726	67916093	11	-	.	ID=522;Type=interchromosomal;Left=chr4:191129525-191129916-;Right=chr9:67915726-67916093+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=SVA:Other:Other;Self chain;RightRepeat=LTR53:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr4	CG	SV	191179111	191179707	30	-	.	ID=1357;Type=interchromosomal;Left=chr4:191179111-191179707-;Right=chr18:102140-102542-;Distance=;DiscordantMatePairAlignments=30;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	102140	102542	30	-	.	ID=1357;Type=interchromosomal;Left=chr4:191179111-191179707-;Right=chr18:102140-102542-;Distance=;DiscordantMatePairAlignments=30;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	23049572	23050109	71	-	.	ID=1279;Type=complex;Left=chr5:23049572-23050109-;Right=chr22:27395551-27396108-;Distance=;DiscordantMatePairAlignments=71;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr22	CG	SV	27395551	27396108	71	-	.	ID=1279;Type=complex;Left=chr5:23049572-23050109-;Right=chr22:27395551-27396108-;Distance=;DiscordantMatePairAlignments=71;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr5	CG	SV	86718271	86834076	98	.	.	ID=1678;Type=tandem-duplication;Left=chr5:86718271-86718801-;Right=chr5:86833370-86834076-;Distance=115275;DiscordantMatePairAlignments=98;LeftRepeat=;RightRepeat=;LeftGenes=NM_002890:+;NM_022650:+;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	86718271	86718801	98	-	.	ID=1678;Type=tandem-duplication;Left=chr5:86718271-86718801;Right=chr5:86833370-86834076
chr5	CG	SV	86833370	86834076	98	-	.	ID=1678;Type=tandem-duplication;Left=chr5:86718271-86718801;Right=chr5:86833370-86834076
chr5	CG	SV	98294024	98309748	92	.	.	ID=4210;Type=deletion;Left=chr5:98294024-98294546+;Right=chr5:98309135-98309748+;Distance=15111;DiscordantMatePairAlignments=92;LeftRepeat=;RightRepeat=HERV16:LTR:ERVL;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	98294024	98294546	92	+	.	ID=4210;Type=deletion;Left=chr5:98294024-98294546;Right=chr5:98309135-98309748
chr5	CG	SV	98309135	98309748	92	+	.	ID=4210;Type=deletion;Left=chr5:98294024-98294546;Right=chr5:98309135-98309748
chr5	CG	SV	101108334	101372266	32	.	.	ID=4208;Type=deletion;Left=chr5:101108334-101108809+;Right=chr5:101371803-101372266+;Distance=263469;DiscordantMatePairAlignments=32;LeftRepeat=L1P4:LINE:L1;Self chain;RightRepeat=L2:LINE:L2;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	101108334	101108809	32	+	.	ID=4208;Type=deletion;Left=chr5:101108334-101108809;Right=chr5:101371803-101372266
chr5	CG	SV	101371803	101372266	32	+	.	ID=4208;Type=deletion;Left=chr5:101108334-101108809;Right=chr5:101371803-101372266
chr5	CG	SV	120253252	120496341	40	.	.	ID=4194;Type=deletion;Left=chr5:120253252-120253787+;Right=chr5:120495940-120496341+;Distance=242688;DiscordantMatePairAlignments=40;LeftRepeat=L1P4:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	120253252	120253787	40	+	.	ID=4194;Type=deletion;Left=chr5:120253252-120253787;Right=chr5:120495940-120496341
chr5	CG	SV	120495940	120496341	40	+	.	ID=4194;Type=deletion;Left=chr5:120253252-120253787;Right=chr5:120495940-120496341
chr5	CG	SV	121952170	121955872	117	.	.	ID=4192;Type=deletion;Left=chr5:121952170-121952765+;Right=chr5:121955333-121955872+;Distance=3163;DiscordantMatePairAlignments=117;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	121952170	121952765	117	+	.	ID=4192;Type=deletion;Left=chr5:121952170-121952765;Right=chr5:121955333-121955872
chr5	CG	SV	121955333	121955872	117	+	.	ID=4192;Type=deletion;Left=chr5:121952170-121952765;Right=chr5:121955333-121955872
chr5	CG	SV	161520501	161521039	68	-	.	ID=1617;Type=interchromosomal;Left=chr5:161520501-161521039-;Right=chr14:30217336-30217970-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_016106:+;NM_182835:+;XRef=;Frequency=0.00
chr14	CG	SV	30217336	30217970	68	-	.	ID=1617;Type=interchromosomal;Left=chr5:161520501-161521039-;Right=chr14:30217336-30217970-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_016106:+;NM_182835:+;XRef=;Frequency=0.00
chr5	CG	SV	164931865	165079029	54	.	.	ID=4162;Type=deletion;Left=chr5:164931865-164932428+;Right=chr5:165078441-165079029+;Distance=146576;DiscordantMatePairAlignments=54;LeftRepeat=MLT1F:LTR:MaLR;RightRepeat=THE1D:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	164931865	164932428	54	+	.	ID=4162;Type=deletion;Left=chr5:164931865-164932428;Right=chr5:165078441-165079029
chr5	CG	SV	165078441	165079029	54	+	.	ID=4162;Type=deletion;Left=chr5:164931865-164932428;Right=chr5:165078441-165079029
chr5	CG	SV	178041672	178046386	10	.	.	ID=4141;Type=deletion;Left=chr5:178041672-178042019+;Right=chr5:178046022-178046386+;Distance=4350;DiscordantMatePairAlignments=10;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluSg:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr5	CG	SV	178041672	178042019	10	+	.	ID=4141;Type=deletion;Left=chr5:178041672-178042019;Right=chr5:178046022-178046386
chr5	CG	SV	178046022	178046386	10	+	.	ID=4141;Type=deletion;Left=chr5:178041672-178042019;Right=chr5:178046022-178046386
chr6	CG	SV	44864439	45047295	40	.	.	ID=1660;Type=tandem-duplication;Left=chr6:44864439-44864888-;Right=chr6:45046617-45047295-;Distance=182407;DiscordantMatePairAlignments=40;LeftRepeat=;RightRepeat=THE1C:LTR:MaLR;LeftGenes=;RightGenes=NM_003599:-;NM_181356:-;XRef=;Frequency=0.00
chr6	CG	SV	44864439	44864888	40	-	.	ID=1660;Type=tandem-duplication;Left=chr6:44864439-44864888;Right=chr6:45046617-45047295
chr6	CG	SV	45046617	45047295	40	-	.	ID=1660;Type=tandem-duplication;Left=chr6:44864439-44864888;Right=chr6:45046617-45047295
chr6	CG	SV	57107765	57153828	16	.	.	ID=4083;Type=complex;Left=chr6:57107765-57108485+;Right=chr6:57153705-57153828+;Distance=45940;DiscordantMatePairAlignments=16;LeftRepeat=;RightRepeat=;LeftGenes=NM_001031623:+;NM_015555:+;RightGenes=NM_004282:+;XRef=;Frequency=0.00
chr6	CG	SV	57107765	57108485	16	+	.	ID=4083;Type=complex;Left=chr6:57107765-57108485;Right=chr6:57153705-57153828
chr6	CG	SV	57153705	57153828	16	+	.	ID=4083;Type=complex;Left=chr6:57107765-57108485;Right=chr6:57153705-57153828
chr6	CG	SV	57153519	57162034	35	.	.	ID=514;Type=complex;Left=chr6:57153519-57153821-;Right=chr6:57161628-57162034+;Distance=7807;DiscordantMatePairAlignments=35;LeftRepeat=L1ME3:LINE:L1;RightRepeat=;LeftGenes=NM_004282:+;RightGenes=NM_016277:-;NM_183227:-;XRef=;Frequency=0.00
chr6	CG	SV	57153519	57153821	35	-	.	ID=514;Type=complex;Left=chr6:57153519-57153821;Right=chr6:57161628-57162034
chr6	CG	SV	57161628	57162034	35	-	.	ID=514;Type=complex;Left=chr6:57153519-57153821;Right=chr6:57161628-57162034
chr6	CG	SV	130183997	132245890	74	.	.	ID=5550;Type=probable-inversion;Left=chr6:130183997-130184560+;Right=chr6:132245493-132245890-;Distance=2061893;DiscordantMatePairAlignments=74;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=;RightGenes=NM_006208:+;XRef=;Frequency=0.00
chr6	CG	SV	130183997	130184560	74	+	.	ID=5550;Type=probable-inversion;Left=chr6:130183997-130184560;Right=chr6:132245493-132245890
chr6	CG	SV	132245493	132245890	74	+	.	ID=5550;Type=probable-inversion;Left=chr6:130183997-130184560;Right=chr6:132245493-132245890
chr6	CG	SV	130330812	132886665	26	.	.	ID=513;Type=probable-inversion;Left=chr6:130330812-130331483-;Right=chr6:132886312-132886665+;Distance=2554829;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=L1MC3:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	130330812	130331483	26	-	.	ID=513;Type=probable-inversion;Left=chr6:130330812-130331483;Right=chr6:132886312-132886665
chr6	CG	SV	132886312	132886665	26	-	.	ID=513;Type=probable-inversion;Left=chr6:130330812-130331483;Right=chr6:132886312-132886665
chr6	CG	SV	132250067	132890097	34	.	.	ID=5548;Type=probable-inversion;Left=chr6:132250067-132250598+;Right=chr6:132889631-132890097-;Distance=640030;DiscordantMatePairAlignments=34;LeftRepeat=Self chain;RightRepeat=MER57A-int:LTR:ERV1;LeftGenes=NM_006208:+;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	132250067	132250598	34	+	.	ID=5548;Type=probable-inversion;Left=chr6:132250067-132250598;Right=chr6:132889631-132890097
chr6	CG	SV	132889631	132890097	34	+	.	ID=5548;Type=probable-inversion;Left=chr6:132250067-132250598;Right=chr6:132889631-132890097
chr6	CG	SV	148756344	148772706	64	.	.	ID=511;Type=probable-inversion;Left=chr6:148756344-148756898-;Right=chr6:148772214-148772706+;Distance=15316;DiscordantMatePairAlignments=64;LeftRepeat=AluSq:SINE:Alu;RightRepeat=;LeftGenes=NM_015278:+;RightGenes=NM_015278:+;XRef=;Frequency=0.00
chr6	CG	SV	148756344	148756898	64	-	.	ID=511;Type=probable-inversion;Left=chr6:148756344-148756898;Right=chr6:148772214-148772706
chr6	CG	SV	148772214	148772706	64	-	.	ID=511;Type=probable-inversion;Left=chr6:148756344-148756898;Right=chr6:148772214-148772706
chr6	CG	SV	152563955	152580615	72	.	.	ID=1645;Type=tandem-duplication;Left=chr6:152563955-152564421-;Right=chr6:152580230-152580615-;Distance=16194;DiscordantMatePairAlignments=72;LeftRepeat=;RightRepeat=;LeftGenes=NM_015293:-;NM_033071:-;NM_182961:-;RightGenes=NM_015293:-;NM_033071:-;NM_182961:-;XRef=;Frequency=0.00
chr6	CG	SV	152563955	152564421	72	-	.	ID=1645;Type=tandem-duplication;Left=chr6:152563955-152564421;Right=chr6:152580230-152580615
chr6	CG	SV	152580230	152580615	72	-	.	ID=1645;Type=tandem-duplication;Left=chr6:152563955-152564421;Right=chr6:152580230-152580615
chr6	CG	SV	162410104	162686511	43	.	.	ID=4014;Type=deletion;Left=chr6:162410104-162410472+;Right=chr6:162685824-162686511+;Distance=275720;DiscordantMatePairAlignments=43;LeftRepeat=Self chain;THE1A:LTR:MaLR;RightRepeat=;LeftGenes=NM_004562:-;NM_013987:-;NM_013988:-;RightGenes=NM_004562:-;NM_013987:-;NM_013988:-;XRef=;Frequency=0.00
chr6	CG	SV	162410104	162410472	43	+	.	ID=4014;Type=deletion;Left=chr6:162410104-162410472;Right=chr6:162685824-162686511
chr6	CG	SV	162685824	162686511	43	+	.	ID=4014;Type=deletion;Left=chr6:162410104-162410472;Right=chr6:162685824-162686511
chr6	CG	SV	162859718	162932994	10	.	.	ID=4011;Type=deletion;Left=chr6:162859718-162860195+;Right=chr6:162932556-162932994+;Distance=72838;DiscordantMatePairAlignments=10;LeftRepeat=;RightRepeat=;LeftGenes=NM_004562:-;NM_013987:-;NM_013988:-;RightGenes=NM_004562:-;NM_013987:-;NM_013988:-;XRef=;Frequency=0.00
chr6	CG	SV	162859718	162860195	10	+	.	ID=4011;Type=deletion;Left=chr6:162859718-162860195;Right=chr6:162932556-162932994
chr6	CG	SV	162932556	162932994	10	+	.	ID=4011;Type=deletion;Left=chr6:162859718-162860195;Right=chr6:162932556-162932994
chr6	CG	SV	167729750	167737155	148	.	.	ID=509;Type=probable-inversion;Left=chr6:167729750-167730551-;Right=chr6:167736636-167737155+;Distance=6085;DiscordantMatePairAlignments=148;LeftRepeat=L1MC3:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	167729750	167730551	148	-	.	ID=509;Type=probable-inversion;Left=chr6:167729750-167730551;Right=chr6:167736636-167737155
chr6	CG	SV	167736636	167737155	148	-	.	ID=509;Type=probable-inversion;Left=chr6:167729750-167730551;Right=chr6:167736636-167737155
chr6	CG	SV	167738310	167738940	114	+	.	ID=3925;Type=interchromosomal;Left=chr6:167738310-167738940+;Right=chr13:86917347-86917863+;Distance=;DiscordantMatePairAlignments=114;LeftRepeat=Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	86917347	86917863	114	+	.	ID=3925;Type=interchromosomal;Left=chr6:167738310-167738940+;Right=chr13:86917347-86917863+;Distance=;DiscordantMatePairAlignments=114;LeftRepeat=Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	168101456	168262571	158	.	.	ID=5546;Type=probable-inversion;Left=chr6:168101456-168102061+;Right=chr6:168261897-168262571-;Distance=161115;DiscordantMatePairAlignments=158;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_001040000:+;NM_001040001:+;RightGenes=;XRef=;Frequency=0.00
chr6	CG	SV	168101456	168102061	158	+	.	ID=5546;Type=probable-inversion;Left=chr6:168101456-168102061;Right=chr6:168261897-168262571
chr6	CG	SV	168261897	168262571	158	+	.	ID=5546;Type=probable-inversion;Left=chr6:168101456-168102061;Right=chr6:168261897-168262571
chr7	CG	SV	948622	950389	34	.	.	ID=3998;Type=deletion;Left=chr7:948622-949164+;Right=chr7:950039-950389+;Distance=1417;DiscordantMatePairAlignments=34;LeftRepeat=GA-rich:Low_complexity:Low_complexity;Self chain;Tandem GAG;Tandem period 18;RightRepeat=GA-rich:Low_complexity:Low_complexity;Self chain;Tandem period 18;LeftGenes=NM_006869:-;RightGenes=NM_006869:-;XRef=;Frequency=0.00
chr7	CG	SV	948622	949164	34	+	.	ID=3998;Type=deletion;Left=chr7:948622-949164;Right=chr7:950039-950389
chr7	CG	SV	950039	950389	34	+	.	ID=3998;Type=deletion;Left=chr7:948622-949164;Right=chr7:950039-950389
chr7	CG	SV	3101894	3105192	15	.	.	ID=3991;Type=deletion;Left=chr7:3101894-3102385+;Right=chr7:3104755-3105192+;Distance=2861;DiscordantMatePairAlignments=15;LeftRepeat=AluSq/x:SINE:Alu;RightRepeat=AluSq:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	3101894	3102385	15	+	.	ID=3991;Type=deletion;Left=chr7:3101894-3102385;Right=chr7:3104755-3105192
chr7	CG	SV	3104755	3105192	15	+	.	ID=3991;Type=deletion;Left=chr7:3101894-3102385;Right=chr7:3104755-3105192
chr7	CG	SV	110113967	110114556	37	+	.	ID=5302;Type=complex;Left=chr7:110113967-110114556+;Right=chr22:27395292-27395889-;Distance=;DiscordantMatePairAlignments=37;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_032549:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr22	CG	SV	27395292	27395889	37	+	.	ID=5302;Type=complex;Left=chr7:110113967-110114556+;Right=chr22:27395292-27395889-;Distance=;DiscordantMatePairAlignments=37;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_032549:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr7	CG	SV	133132212	133143312	24	.	.	ID=1599;Type=tandem-duplication;Left=chr7:133132212-133132748-;Right=chr7:133142966-133143312-;Distance=10564;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=;LeftGenes=NM_021807:+;RightGenes=NM_021807:+;XRef=;Frequency=0.00
chr7	CG	SV	133132212	133132748	24	-	.	ID=1599;Type=tandem-duplication;Left=chr7:133132212-133132748;Right=chr7:133142966-133143312
chr7	CG	SV	133142966	133143312	24	-	.	ID=1599;Type=tandem-duplication;Left=chr7:133132212-133132748;Right=chr7:133142966-133143312
chr7	CG	SV	133519711	133520247	53	-	.	ID=306;Type=interchromosomal;Left=chr7:133519711-133520247-;Right=chr18:25580290-25580784+;Distance=;DiscordantMatePairAlignments=53;LeftRepeat=;RightRepeat=;LeftGenes=NM_144648:+;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	25580290	25580784	53	-	.	ID=306;Type=interchromosomal;Left=chr7:133519711-133520247-;Right=chr18:25580290-25580784+;Distance=;DiscordantMatePairAlignments=53;LeftRepeat=;RightRepeat=;LeftGenes=NM_144648:+;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	140066224	140255672	91	.	.	ID=3885;Type=deletion;Left=chr7:140066224-140066780+;Right=chr7:140255041-140255672+;Distance=188817;DiscordantMatePairAlignments=91;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_004333:-;XRef=;Frequency=0.00
chr7	CG	SV	140066224	140066780	91	+	.	ID=3885;Type=deletion;Left=chr7:140066224-140066780;Right=chr7:140255041-140255672
chr7	CG	SV	140255041	140255672	91	+	.	ID=3885;Type=deletion;Left=chr7:140066224-140066780;Right=chr7:140255041-140255672
chr7	CG	SV	144703513	144709224	49	.	.	ID=3878;Type=deletion;Left=chr7:144703513-144704099+;Right=chr7:144708635-144709224+;Distance=5122;DiscordantMatePairAlignments=49;LeftRepeat=L1MD2:LINE:L1;RightRepeat=THE1D:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	144703513	144704099	49	+	.	ID=3878;Type=deletion;Left=chr7:144703513-144704099;Right=chr7:144708635-144709224
chr7	CG	SV	144708635	144709224	49	+	.	ID=3878;Type=deletion;Left=chr7:144703513-144704099;Right=chr7:144708635-144709224
chr7	CG	SV	151795880	151796820	28	.	.	ID=3872;Type=deletion;Left=chr7:151795880-151796373+;Right=chr7:151796549-151796820+;Distance=669;DiscordantMatePairAlignments=28;LeftRepeat=Self chain;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	151795880	151796373	28	+	.	ID=3872;Type=deletion;Left=chr7:151795880-151796373;Right=chr7:151796549-151796820
chr7	CG	SV	151796549	151796820	28	+	.	ID=3872;Type=deletion;Left=chr7:151795880-151796373;Right=chr7:151796549-151796820
chr7	CG	SV	156789004	156790068	16	.	.	ID=3859;Type=deletion;Left=chr7:156789004-156789775+;Right=chr7:156789828-156790068+;Distance=824;DiscordantMatePairAlignments=16;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr7	CG	SV	156789004	156789775	16	+	.	ID=3859;Type=deletion;Left=chr7:156789004-156789775;Right=chr7:156789828-156790068
chr7	CG	SV	156789828	156790068	16	+	.	ID=3859;Type=deletion;Left=chr7:156789004-156789775;Right=chr7:156789828-156790068
chr8	CG	SV	8764151	8766691	57	.	.	ID=3833;Type=deletion;Left=chr8:8764151-8764824+;Right=chr8:8766092-8766691+;Distance=1941;DiscordantMatePairAlignments=57;LeftRepeat=Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_004225:-;RightGenes=NM_004225:-;XRef=;Frequency=0.00
chr8	CG	SV	8764151	8764824	57	+	.	ID=3833;Type=deletion;Left=chr8:8764151-8764824;Right=chr8:8766092-8766691
chr8	CG	SV	8766092	8766691	57	+	.	ID=3833;Type=deletion;Left=chr8:8764151-8764824;Right=chr8:8766092-8766691
chr8	CG	SV	36078419	36081845	44	.	.	ID=465;Type=complex;Left=chr8:36078419-36078973-;Right=chr8:36081402-36081845+;Distance=2429;DiscordantMatePairAlignments=44;LeftRepeat=AluJo:SINE:Alu;RightRepeat=L1MC1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	36078419	36078973	44	-	.	ID=465;Type=complex;Left=chr8:36078419-36078973;Right=chr8:36081402-36081845
chr8	CG	SV	36081402	36081845	44	-	.	ID=465;Type=complex;Left=chr8:36078419-36078973;Right=chr8:36081402-36081845
chr8	CG	SV	36080521	36081914	57	.	.	ID=3818;Type=complex;Left=chr8:36080521-36081104+;Right=chr8:36081402-36081914+;Distance=881;DiscordantMatePairAlignments=57;LeftRepeat=;RightRepeat=L1MC1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	36080521	36081104	57	+	.	ID=3818;Type=complex;Left=chr8:36080521-36081104;Right=chr8:36081402-36081914
chr8	CG	SV	36081402	36081914	57	+	.	ID=3818;Type=complex;Left=chr8:36080521-36081104;Right=chr8:36081402-36081914
chr8	CG	SV	36141670	36142192	17	+	.	ID=2895;Type=interchromosomal;Left=chr8:36141670-36142192+;Right=chrX:69663172-69664040+;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluSx:SINE:Alu;Tandem A;RightRepeat=L1MC4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	69663172	69664040	17	+	.	ID=2895;Type=interchromosomal;Left=chr8:36141670-36142192+;Right=chrX:69663172-69664040+;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluSx:SINE:Alu;Tandem A;RightRepeat=L1MC4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	124426774	124524454	22	.	.	ID=3766;Type=deletion;Left=chr8:124426774-124427283+;Right=chr8:124524002-124524454+;Distance=97228;DiscordantMatePairAlignments=22;LeftRepeat=AT_rich:Low_complexity:Low_complexity;RightRepeat=AluSg:SINE:Alu;LeftGenes=NM_014109:-;RightGenes=;XRef=;Frequency=0.00
chr8	CG	SV	124426774	124427283	22	+	.	ID=3766;Type=deletion;Left=chr8:124426774-124427283;Right=chr8:124524002-124524454
chr8	CG	SV	124524002	124524454	22	+	.	ID=3766;Type=deletion;Left=chr8:124426774-124427283;Right=chr8:124524002-124524454
chr9	CG	SV	18064328	18069057	85	.	.	ID=451;Type=probable-inversion;Left=chr9:18064328-18065011-;Right=chr9:18068296-18069057+;Distance=3285;DiscordantMatePairAlignments=85;LeftRepeat=CT-rich:Low_complexity:Low_complexity;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	18064328	18065011	85	-	.	ID=451;Type=probable-inversion;Left=chr9:18064328-18065011;Right=chr9:18068296-18069057
chr9	CG	SV	18068296	18069057	85	-	.	ID=451;Type=probable-inversion;Left=chr9:18064328-18065011;Right=chr9:18068296-18069057
chr9	CG	SV	28432994	28571192	50	.	.	ID=3725;Type=deletion;Left=chr9:28432994-28433502+;Right=chr9:28570679-28571192+;Distance=137685;DiscordantMatePairAlignments=50;LeftRepeat=;RightRepeat=;LeftGenes=NM_152570:-;RightGenes=NM_152570:-;XRef=;Frequency=0.00
chr9	CG	SV	28432994	28433502	50	+	.	ID=3725;Type=deletion;Left=chr9:28432994-28433502;Right=chr9:28570679-28571192
chr9	CG	SV	28570679	28571192	50	+	.	ID=3725;Type=deletion;Left=chr9:28432994-28433502;Right=chr9:28570679-28571192
chr9	CG	SV	80972444	80973666	159	.	.	ID=441;Type=probable-inversion;Left=chr9:80972444-80972830-;Right=chr9:80973151-80973666+;Distance=321;DiscordantMatePairAlignments=159;LeftRepeat=MLT1K:LTR:MaLR;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	80972444	80972830	159	-	.	ID=441;Type=probable-inversion;Left=chr9:80972444-80972830;Right=chr9:80973151-80973666
chr9	CG	SV	80973151	80973666	159	-	.	ID=441;Type=probable-inversion;Left=chr9:80972444-80972830;Right=chr9:80973151-80973666
chr9	CG	SV	81951198	81951826	271	-	.	ID=1426;Type=interchromosomal;Left=chr9:81951198-81951826-;Right=chr13:61645090-61645677-;Distance=;DiscordantMatePairAlignments=271;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	61645090	61645677	271	-	.	ID=1426;Type=interchromosomal;Left=chr9:81951198-81951826-;Right=chr13:61645090-61645677-;Distance=;DiscordantMatePairAlignments=271;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	128256355	128458328	93	.	.	ID=3662;Type=deletion;Left=chr9:128256355-128256950+;Right=chr9:128457801-128458328+;Distance=201446;DiscordantMatePairAlignments=93;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_033446:+;RightGenes=NM_002316:+;XRef=;Frequency=0.00
chr9	CG	SV	128256355	128256950	93	+	.	ID=3662;Type=deletion;Left=chr9:128256355-128256950;Right=chr9:128457801-128458328
chr9	CG	SV	128457801	128458328	93	+	.	ID=3662;Type=deletion;Left=chr9:128256355-128256950;Right=chr9:128457801-128458328
chr9	CG	SV	140032250	140034056	20	.	.	ID=3633;Type=deletion;Left=chr9:140032250-140032691+;Right=chr9:140033878-140034056+;Distance=1628;DiscordantMatePairAlignments=20;LeftRepeat=Self chain;Tandem period 37;RightRepeat=Self chain;LeftGenes=NM_000718:+;RightGenes=NM_000718:+;XRef=;Frequency=0.06
chr9	CG	SV	140032250	140032691	20	+	.	ID=3633;Type=deletion;Left=chr9:140032250-140032691;Right=chr9:140033878-140034056
chr9	CG	SV	140033878	140034056	20	+	.	ID=3633;Type=deletion;Left=chr9:140032250-140032691;Right=chr9:140033878-140034056
chr9	CG	SV	140138980	140153873	12	.	.	ID=3632;Type=deletion;Left=chr9:140138980-140139099+;Right=chr9:140153504-140153873+;Distance=14524;DiscordantMatePairAlignments=12;LeftRepeat=(TTG)n:Simple_repeat:Simple_repeat;Self chain;Tandem TTG;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr9	CG	SV	140138980	140139099	12	+	.	ID=3632;Type=deletion;Left=chr9:140138980-140139099;Right=chr9:140153504-140153873
chr9	CG	SV	140153504	140153873	12	+	.	ID=3632;Type=deletion;Left=chr9:140138980-140139099;Right=chr9:140153504-140153873
chr10	CG	SV	52595633	52992546	27	.	.	ID=3575;Type=deletion;Left=chr10:52595633-52595786+;Right=chr10:52992070-52992546+;Distance=396437;DiscordantMatePairAlignments=27;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001098512:+;NM_006258:+;RightGenes=NM_001098512:+;NM_006258:+;XRef=;Frequency=0.00
chr10	CG	SV	52595633	52595786	27	+	.	ID=3575;Type=deletion;Left=chr10:52595633-52595786;Right=chr10:52992070-52992546
chr10	CG	SV	52992070	52992546	27	+	.	ID=3575;Type=deletion;Left=chr10:52595633-52595786;Right=chr10:52992070-52992546
chr10	CG	SV	56356483	56381678	37	.	.	ID=3572;Type=deletion;Left=chr10:56356483-56356965+;Right=chr10:56381113-56381678+;Distance=24630;DiscordantMatePairAlignments=37;LeftRepeat=L1PA13:LINE:L1;Self chain;RightRepeat=L1MC2:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	56356483	56356965	37	+	.	ID=3572;Type=deletion;Left=chr10:56356483-56356965;Right=chr10:56381113-56381678
chr10	CG	SV	56381113	56381678	37	+	.	ID=3572;Type=deletion;Left=chr10:56356483-56356965;Right=chr10:56381113-56381678
chr10	CG	SV	56423945	56604143	40	.	.	ID=3571;Type=deletion;Left=chr10:56423945-56424452+;Right=chr10:56603586-56604143+;Distance=179641;DiscordantMatePairAlignments=40;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr10	CG	SV	56423945	56424452	40	+	.	ID=3571;Type=deletion;Left=chr10:56423945-56424452;Right=chr10:56603586-56604143
chr10	CG	SV	56603586	56604143	40	+	.	ID=3571;Type=deletion;Left=chr10:56423945-56424452;Right=chr10:56603586-56604143
chr11	CG	SV	19708432	19714847	107	.	.	ID=3481;Type=deletion;Left=chr11:19708432-19709016+;Right=chr11:19714181-19714847+;Distance=5749;DiscordantMatePairAlignments=107;LeftRepeat=;RightRepeat=;LeftGenes=NM_001111018:+;NM_145117:+;NM_182964:+;RightGenes=NM_001111018:+;NM_145117:+;NM_182964:+;XRef=;Frequency=0.00
chr11	CG	SV	19708432	19709016	107	+	.	ID=3481;Type=deletion;Left=chr11:19708432-19709016;Right=chr11:19714181-19714847
chr11	CG	SV	19714181	19714847	107	+	.	ID=3481;Type=deletion;Left=chr11:19708432-19709016;Right=chr11:19714181-19714847
chr11	CG	SV	37678950	37695111	68	.	.	ID=1471;Type=tandem-duplication;Left=chr11:37678950-37679545-;Right=chr11:37694492-37695111-;Distance=15566;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr11	CG	SV	37678950	37679545	68	-	.	ID=1471;Type=tandem-duplication;Left=chr11:37678950-37679545;Right=chr11:37694492-37695111
chr11	CG	SV	37694492	37695111	68	-	.	ID=1471;Type=tandem-duplication;Left=chr11:37678950-37679545;Right=chr11:37694492-37695111
chr11	CG	SV	84193894	84260494	61	.	.	ID=3413;Type=deletion;Left=chr11:84193894-84194462+;Right=chr11:84260053-84260494+;Distance=66159;DiscordantMatePairAlignments=61;LeftRepeat=L1MD1:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001142699:-;NM_001364:-;RightGenes=NM_001142699:-;NM_001364:-;XRef=;Frequency=0.00
chr11	CG	SV	84193894	84194462	61	+	.	ID=3413;Type=deletion;Left=chr11:84193894-84194462;Right=chr11:84260053-84260494
chr11	CG	SV	84260053	84260494	61	+	.	ID=3413;Type=deletion;Left=chr11:84193894-84194462;Right=chr11:84260053-84260494
chr12	CG	SV	6718238	6719205	13	.	.	ID=3369;Type=deletion;Left=chr12:6718238-6718794+;Right=chr12:6718881-6719205+;Distance=643;DiscordantMatePairAlignments=13;LeftRepeat=AluSc:SINE:Alu;Tandem period 134;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	6718238	6718794	13	+	.	ID=3369;Type=deletion;Left=chr12:6718238-6718794;Right=chr12:6718881-6719205
chr12	CG	SV	6718881	6719205	13	+	.	ID=3369;Type=deletion;Left=chr12:6718238-6718794;Right=chr12:6718881-6719205
chr12	CG	SV	17507658	17509480	59	.	.	ID=3359;Type=deletion;Left=chr12:17507658-17508071+;Right=chr12:17508880-17509480+;Distance=1222;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	17507658	17508071	59	+	.	ID=3359;Type=deletion;Left=chr12:17507658-17508071;Right=chr12:17508880-17509480
chr12	CG	SV	17508880	17509480	59	+	.	ID=3359;Type=deletion;Left=chr12:17507658-17508071;Right=chr12:17508880-17509480
chr12	CG	SV	66617867	66620972	100	.	.	ID=1436;Type=tandem-duplication;Left=chr12:66617867-66618500-;Right=chr12:66620410-66620972-;Distance=2472;DiscordantMatePairAlignments=100;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	66617867	66618500	100	-	.	ID=1436;Type=tandem-duplication;Left=chr12:66617867-66618500;Right=chr12:66620410-66620972
chr12	CG	SV	66620410	66620972	100	-	.	ID=1436;Type=tandem-duplication;Left=chr12:66617867-66618500;Right=chr12:66620410-66620972
chr12	CG	SV	76478897	76508897	65	.	.	ID=1435;Type=tandem-duplication;Left=chr12:76478897-76479343-;Right=chr12:76508372-76508897-;Distance=29554;DiscordantMatePairAlignments=65;LeftRepeat=L1M:LINE:L1;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr12	CG	SV	76478897	76479343	65	-	.	ID=1435;Type=tandem-duplication;Left=chr12:76478897-76479343;Right=chr12:76508372-76508897
chr12	CG	SV	76508372	76508897	65	-	.	ID=1435;Type=tandem-duplication;Left=chr12:76478897-76479343;Right=chr12:76508372-76508897
chr12	CG	SV	99859423	99859912	31	+	.	ID=5156;Type=complex;Left=chr12:99859423-99859912+;Right=chr22:27395476-27395889-;Distance=;DiscordantMatePairAlignments=31;LeftRepeat=L1ME3B:LINE:L1;RightRepeat=;LeftGenes=NM_178826:+;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr22	CG	SV	27395476	27395889	31	+	.	ID=5156;Type=complex;Left=chr12:99859423-99859912+;Right=chr22:27395476-27395889-;Distance=;DiscordantMatePairAlignments=31;LeftRepeat=L1ME3B:LINE:L1;RightRepeat=;LeftGenes=NM_178826:+;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr12	CG	SV	123675231	123904486	62	.	.	ID=1416;Type=tandem-duplication;Left=chr12:123675231-123675891-;Right=chr12:123904189-123904486-;Distance=228595;DiscordantMatePairAlignments=62;LeftRepeat=AluJo:SINE:Alu;RightRepeat=L2:LINE:L2;LeftGenes=;RightGenes=NM_001082959:-;NM_005505:-;XRef=;Frequency=0.00
chr12	CG	SV	123675231	123675891	62	-	.	ID=1416;Type=tandem-duplication;Left=chr12:123675231-123675891;Right=chr12:123904189-123904486
chr12	CG	SV	123904189	123904486	62	-	.	ID=1416;Type=tandem-duplication;Left=chr12:123675231-123675891;Right=chr12:123904189-123904486
chr13	CG	SV	23620946	23645481	89	.	.	ID=3264;Type=deletion;Left=chr13:23620946-23621563+;Right=chr13:23644955-23645481+;Distance=24009;DiscordantMatePairAlignments=89;LeftRepeat=Self chain;RightRepeat=L1MD1:LINE:L1;Self chain;LeftGenes=;RightGenes=NM_001166271:+;NM_153023:+;XRef=;Frequency=0.00
chr13	CG	SV	23620946	23621563	89	+	.	ID=3264;Type=deletion;Left=chr13:23620946-23621563;Right=chr13:23644955-23645481
chr13	CG	SV	23644955	23645481	89	+	.	ID=3264;Type=deletion;Left=chr13:23620946-23621563;Right=chr13:23644955-23645481
chr13	CG	SV	25170862	25172758	72	.	.	ID=3262;Type=deletion;Left=chr13:25170862-25171541+;Right=chr13:25172085-25172758+;Distance=1223;DiscordantMatePairAlignments=72;LeftRepeat=;RightRepeat=;LeftGenes=NM_016529:+;RightGenes=NM_016529:+;XRef=;Frequency=0.00
chr13	CG	SV	25170862	25171541	72	+	.	ID=3262;Type=deletion;Left=chr13:25170862-25171541;Right=chr13:25172085-25172758
chr13	CG	SV	25172085	25172758	72	+	.	ID=3262;Type=deletion;Left=chr13:25170862-25171541;Right=chr13:25172085-25172758
chr13	CG	SV	30094958	30096252	82	.	.	ID=3252;Type=deletion;Left=chr13:30094958-30095622+;Right=chr13:30095770-30096252+;Distance=812;DiscordantMatePairAlignments=82;LeftRepeat=;RightRepeat=MER21B:LTR:ERV1;LeftGenes=NM_005800:+;RightGenes=NM_005800:+;XRef=;Frequency=0.00
chr13	CG	SV	30094958	30095622	82	+	.	ID=3252;Type=deletion;Left=chr13:30094958-30095622;Right=chr13:30095770-30096252
chr13	CG	SV	30095770	30096252	82	+	.	ID=3252;Type=deletion;Left=chr13:30094958-30095622;Right=chr13:30095770-30096252
chr13	CG	SV	61213446	61221118	323	.	.	ID=372;Type=probable-inversion;Left=chr13:61213446-61214041-;Right=chr13:61220487-61221118+;Distance=6446;DiscordantMatePairAlignments=323;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	61213446	61214041	323	-	.	ID=372;Type=probable-inversion;Left=chr13:61213446-61214041;Right=chr13:61220487-61221118
chr13	CG	SV	61220487	61221118	323	-	.	ID=372;Type=probable-inversion;Left=chr13:61213446-61214041;Right=chr13:61220487-61221118
chr13	CG	SV	62847334	62847983	11	-	.	ID=161;Type=interchromosomal;Left=chr13:62847334-62847983-;Right=chr19:18924852-18925146+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=AluJb:SINE:Alu;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	18924852	18925146	11	-	.	ID=161;Type=interchromosomal;Left=chr13:62847334-62847983-;Right=chr19:18924852-18925146+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=AluJb:SINE:Alu;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	67887094	67887752	153	+	.	ID=5243;Type=interchromosomal;Left=chr13:67887094-67887752+;Right=chr18:36916261-36916953-;Distance=;DiscordantMatePairAlignments=153;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	36916261	36916953	153	+	.	ID=5243;Type=interchromosomal;Left=chr13:67887094-67887752+;Right=chr18:36916261-36916953-;Distance=;DiscordantMatePairAlignments=153;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	73503518	73506266	57	.	.	ID=3218;Type=deletion;Left=chr13:73503518-73504103+;Right=chr13:73505572-73506266+;Distance=2054;DiscordantMatePairAlignments=57;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=NM_007249:-;RightGenes=NM_007249:-;XRef=;Frequency=0.00
chr13	CG	SV	73503518	73504103	57	+	.	ID=3218;Type=deletion;Left=chr13:73503518-73504103;Right=chr13:73505572-73506266
chr13	CG	SV	73505572	73506266	57	+	.	ID=3218;Type=deletion;Left=chr13:73503518-73504103;Right=chr13:73505572-73506266
chr13	CG	SV	91740904	92563894	34	.	.	ID=3209;Type=deletion;Left=chr13:91740904-91741351+;Right=chr13:92563358-92563894+;Distance=822454;DiscordantMatePairAlignments=34;LeftRepeat=L1PB1:LINE:L1;RightRepeat=;LeftGenes=NM_004466:+;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	91740904	91741351	34	+	.	ID=3209;Type=deletion;Left=chr13:91740904-91741351;Right=chr13:92563358-92563894
chr13	CG	SV	92563358	92563894	34	+	.	ID=3209;Type=deletion;Left=chr13:91740904-91741351;Right=chr13:92563358-92563894
chr13	CG	SV	92724372	92781859	13	.	.	ID=3208;Type=complex;Left=chr13:92724372-92724813+;Right=chr13:92781542-92781859+;Distance=57170;DiscordantMatePairAlignments=13;LeftRepeat=;RightRepeat=;LeftGenes=NM_005708:+;RightGenes=NM_005708:+;XRef=;Frequency=0.00
chr13	CG	SV	92724372	92724813	13	+	.	ID=3208;Type=complex;Left=chr13:92724372-92724813;Right=chr13:92781542-92781859
chr13	CG	SV	92781542	92781859	13	+	.	ID=3208;Type=complex;Left=chr13:92724372-92724813;Right=chr13:92781542-92781859
chr13	CG	SV	92780284	92782111	12	.	.	ID=369;Type=complex;Left=chr13:92780284-92780393-;Right=chr13:92781545-92782111+;Distance=1152;DiscordantMatePairAlignments=12;LeftRepeat=MER20B:DNA:MER1_type;RightRepeat=;LeftGenes=NM_005708:+;RightGenes=NM_005708:+;XRef=;Frequency=0.00
chr13	CG	SV	92780284	92780393	12	-	.	ID=369;Type=complex;Left=chr13:92780284-92780393;Right=chr13:92781545-92782111
chr13	CG	SV	92781545	92782111	12	-	.	ID=369;Type=complex;Left=chr13:92780284-92780393;Right=chr13:92781545-92782111
chr13	CG	SV	93255345	93632370	83	.	.	ID=3207;Type=deletion;Left=chr13:93255345-93255916+;Right=chr13:93631737-93632370+;Distance=376392;DiscordantMatePairAlignments=83;LeftRepeat=;RightRepeat=MIR3:SINE:MIR;LeftGenes=NM_005708:+;RightGenes=NM_005708:+;XRef=;Frequency=0.00
chr13	CG	SV	93255345	93255916	83	+	.	ID=3207;Type=deletion;Left=chr13:93255345-93255916;Right=chr13:93631737-93632370
chr13	CG	SV	93631737	93632370	83	+	.	ID=3207;Type=deletion;Left=chr13:93255345-93255916;Right=chr13:93631737-93632370
chr13	CG	SV	94244887	94286246	145	.	.	ID=5416;Type=probable-inversion;Left=chr13:94244887-94245613+;Right=chr13:94285549-94286246-;Distance=41359;DiscordantMatePairAlignments=145;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr13	CG	SV	94244887	94245613	145	+	.	ID=5416;Type=probable-inversion;Left=chr13:94244887-94245613;Right=chr13:94285549-94286246
chr13	CG	SV	94285549	94286246	145	+	.	ID=5416;Type=probable-inversion;Left=chr13:94244887-94245613;Right=chr13:94285549-94286246
chr14	CG	SV	60669760	60675695	10	.	.	ID=3156;Type=deletion;Left=chr14:60669760-60670267+;Right=chr14:60675276-60675695+;Distance=5516;DiscordantMatePairAlignments=10;LeftRepeat=LTR7:LTR:ERV1;RightRepeat=LTR7:LTR:ERV1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr14	CG	SV	60669760	60670267	10	+	.	ID=3156;Type=deletion;Left=chr14:60669760-60670267;Right=chr14:60675276-60675695
chr14	CG	SV	60675276	60675695	10	+	.	ID=3156;Type=deletion;Left=chr14:60669760-60670267;Right=chr14:60675276-60675695
chr14	CG	SV	66909183	66950565	51	.	.	ID=3154;Type=deletion;Left=chr14:66909183-66909749+;Right=chr14:66950119-66950565+;Distance=40936;DiscordantMatePairAlignments=51;LeftRepeat=AluSc:SINE:Alu;RightRepeat=;LeftGenes=NM_004094:+;RightGenes=;XRef=;Frequency=0.00
chr14	CG	SV	66909183	66909749	51	+	.	ID=3154;Type=deletion;Left=chr14:66909183-66909749;Right=chr14:66950119-66950565
chr14	CG	SV	66950119	66950565	51	+	.	ID=3154;Type=deletion;Left=chr14:66909183-66909749;Right=chr14:66950119-66950565
chr14	CG	SV	86617154	86629211	86	.	.	ID=1392;Type=tandem-duplication;Left=chr14:86617154-86617680-;Right=chr14:86628588-86629211-;Distance=11531;DiscordantMatePairAlignments=86;LeftRepeat=;RightRepeat=MIR:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr14	CG	SV	86617154	86617680	86	-	.	ID=1392;Type=tandem-duplication;Left=chr14:86617154-86617680;Right=chr14:86628588-86629211
chr14	CG	SV	86628588	86629211	86	-	.	ID=1392;Type=tandem-duplication;Left=chr14:86617154-86617680;Right=chr14:86628588-86629211
chr15	CG	SV	22884280	22885831	14	.	.	ID=3109;Type=deletion;Left=chr15:22884280-22884803+;Right=chr15:22885422-22885831+;Distance=1142;DiscordantMatePairAlignments=14;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.06
chr15	CG	SV	22884280	22884803	14	+	.	ID=3109;Type=deletion;Left=chr15:22884280-22884803;Right=chr15:22885422-22885831
chr15	CG	SV	22885422	22885831	14	+	.	ID=3109;Type=deletion;Left=chr15:22884280-22884803;Right=chr15:22885422-22885831
chr16	CG	SV	1972851	2013696	37	.	.	ID=3032;Type=deletion;Left=chr16:1972851-1973536+;Right=chr16:2013149-2013696+;Distance=40298;DiscordantMatePairAlignments=37;LeftRepeat=AluJo:SINE:Alu;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr16	CG	SV	1972851	1973536	37	+	.	ID=3032;Type=deletion;Left=chr16:1972851-1973536;Right=chr16:2013149-2013696
chr16	CG	SV	2013149	2013696	37	+	.	ID=3032;Type=deletion;Left=chr16:1972851-1973536;Right=chr16:2013149-2013696
chr16	CG	SV	68281808	68282978	53	.	.	ID=1174;Type=tandem-duplication;Left=chr16:68281808-68282304-;Right=chr16:68282435-68282978-;Distance=674;DiscordantMatePairAlignments=53;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001113178:+;NM_006599:+;NM_138713:+;NM_138714:+;NM_173214:+;RightGenes=NM_001113178:+;NM_006599:+;NM_138713:+;NM_138714:+;NM_173214:+;XRef=;Frequency=0.00
chr16	CG	SV	68281808	68282304	53	-	.	ID=1174;Type=tandem-duplication;Left=chr16:68281808-68282304;Right=chr16:68282435-68282978
chr16	CG	SV	68282435	68282978	53	-	.	ID=1174;Type=tandem-duplication;Left=chr16:68281808-68282304;Right=chr16:68282435-68282978
chr17	CG	SV	15162438	15162941	26	+	.	ID=5139;Type=complex;Left=chr17:15162438-15162941+;Right=chr22:27395459-27395912-;Distance=;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=;LeftGenes=NM_031898:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr22	CG	SV	27395459	27395912	26	+	.	ID=5139;Type=complex;Left=chr17:15162438-15162941+;Right=chr22:27395459-27395912-;Distance=;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=;LeftGenes=NM_031898:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00
chr17	CG	SV	18070771	18090238	39	.	.	ID=5224;Type=probable-inversion;Left=chr17:18070771-18071407+;Right=chr17:18089644-18090238-;Distance=19467;DiscordantMatePairAlignments=39;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_004140:+;RightGenes=NM_002018:-;XRef=;Frequency=0.00
chr17	CG	SV	18070771	18071407	39	+	.	ID=5224;Type=probable-inversion;Left=chr17:18070771-18071407;Right=chr17:18089644-18090238
chr17	CG	SV	18089644	18090238	39	+	.	ID=5224;Type=probable-inversion;Left=chr17:18070771-18071407;Right=chr17:18089644-18090238
chr17	CG	SV	25525595	25539027	87	.	.	ID=2724;Type=deletion;Left=chr17:25525595-25526223+;Right=chr17:25538316-25539027+;Distance=12721;DiscordantMatePairAlignments=87;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_032141:+;RightGenes=;XRef=;Frequency=0.00
chr17	CG	SV	25525595	25526223	87	+	.	ID=2724;Type=deletion;Left=chr17:25525595-25526223;Right=chr17:25538316-25539027
chr17	CG	SV	25538316	25539027	87	+	.	ID=2724;Type=deletion;Left=chr17:25525595-25526223;Right=chr17:25538316-25539027
chr17	CG	SV	36849187	36849689	68	-	.	ID=1013;Type=interchromosomal;Left=chr17:36849187-36849689-;Right=chr22:39682031-39682618-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=AluS:SINE:Alu;LeftGenes=NM_006771:-;RightGenes=NM_014248:+;XRef=;Frequency=0.00
chr22	CG	SV	39682031	39682618	68	-	.	ID=1013;Type=interchromosomal;Left=chr17:36849187-36849689-;Right=chr22:39682031-39682618-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=AluS:SINE:Alu;LeftGenes=NM_006771:-;RightGenes=NM_014248:+;XRef=;Frequency=0.00
chr17	CG	SV	50234983	50235967	21	.	.	ID=2685;Type=deletion;Left=chr17:50234983-50235591+;Right=chr17:50235514-50235967+;Distance=531;DiscordantMatePairAlignments=21;LeftRepeat=Self chain;RightRepeat=L1MEb:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr17	CG	SV	50234983	50235591	21	+	.	ID=2685;Type=deletion;Left=chr17:50234983-50235591;Right=chr17:50235514-50235967
chr17	CG	SV	50235514	50235967	21	+	.	ID=2685;Type=deletion;Left=chr17:50234983-50235591;Right=chr17:50235514-50235967
chr17	CG	SV	52380503	52600388	41	.	.	ID=1161;Type=tandem-duplication;Left=chr17:52380503-52380988-;Right=chr17:52599816-52600388-;Distance=219400;DiscordantMatePairAlignments=41;LeftRepeat=Self chain;RightRepeat=L1MC1:LINE:L1;LeftGenes=NM_004645:-;RightGenes=;XRef=;Frequency=0.00
chr17	CG	SV	52380503	52380988	41	-	.	ID=1161;Type=tandem-duplication;Left=chr17:52380503-52380988;Right=chr17:52599816-52600388
chr17	CG	SV	52599816	52600388	41	-	.	ID=1161;Type=tandem-duplication;Left=chr17:52380503-52380988;Right=chr17:52599816-52600388
chr17	CG	SV	52384579	52388063	29	.	.	ID=2682;Type=deletion;Left=chr17:52384579-52384988+;Right=chr17:52387530-52388063+;Distance=2951;DiscordantMatePairAlignments=29;LeftRepeat=SegDup;Self chain;RightRepeat=AluSx:SINE:Alu;SegDup;Self chain;LeftGenes=NM_004645:-;RightGenes=NM_004645:-;XRef=;Frequency=0.00
chr17	CG	SV	52384579	52384988	29	+	.	ID=2682;Type=deletion;Left=chr17:52384579-52384988;Right=chr17:52387530-52388063
chr17	CG	SV	52387530	52388063	29	+	.	ID=2682;Type=deletion;Left=chr17:52384579-52384988;Right=chr17:52387530-52388063
chr17	CG	SV	77834977	77835703	16	.	.	ID=1156;Type=tandem-duplication;Left=chr17:77834977-77835344-;Right=chr17:77835317-77835703-;Distance=359;DiscordantMatePairAlignments=16;LeftRepeat=AluY:SINE:Alu;Self chain;RightRepeat=AluSp:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr17	CG	SV	77834977	77835344	16	-	.	ID=1156;Type=tandem-duplication;Left=chr17:77834977-77835344;Right=chr17:77835317-77835703
chr17	CG	SV	77835317	77835703	16	-	.	ID=1156;Type=tandem-duplication;Left=chr17:77834977-77835344;Right=chr17:77835317-77835703
chr18	CG	SV	60936130	60991253	43	.	.	ID=1092;Type=tandem-duplication;Left=chr18:60936130-60936679-;Right=chr18:60990797-60991253-;Distance=54574;DiscordantMatePairAlignments=43;LeftRepeat=L2:LINE:L2;RightRepeat=L1PB1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr18	CG	SV	60936130	60936679	43	-	.	ID=1092;Type=tandem-duplication;Left=chr18:60936130-60936679;Right=chr18:60990797-60991253
chr18	CG	SV	60990797	60991253	43	-	.	ID=1092;Type=tandem-duplication;Left=chr18:60936130-60936679;Right=chr18:60990797-60991253
chr19	CG	SV	8404114	8432308	18	.	.	ID=2545;Type=deletion;Left=chr19:8404114-8404555+;Right=chr19:8431839-8432308+;Distance=27725;DiscordantMatePairAlignments=18;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=Self chain;LeftGenes=NM_001005415:+;NM_001005416:+;NM_016496:+;RightGenes=NM_005968:+;NM_031203:+;XRef=;Frequency=0.00
chr19	CG	SV	8404114	8404555	18	+	.	ID=2545;Type=deletion;Left=chr19:8404114-8404555;Right=chr19:8431839-8432308
chr19	CG	SV	8431839	8432308	18	+	.	ID=2545;Type=deletion;Left=chr19:8404114-8404555;Right=chr19:8431839-8432308
chr19	CG	SV	16434073	16560179	103	.	.	ID=5179;Type=probable-inversion;Left=chr19:16434073-16434667+;Right=chr19:16559679-16560179-;Distance=126106;DiscordantMatePairAlignments=103;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_021235:-;RightGenes=NM_004831:-;XRef=;Frequency=0.00
chr19	CG	SV	16434073	16434667	103	+	.	ID=5179;Type=probable-inversion;Left=chr19:16434073-16434667;Right=chr19:16559679-16560179
chr19	CG	SV	16559679	16560179	103	+	.	ID=5179;Type=probable-inversion;Left=chr19:16434073-16434667;Right=chr19:16559679-16560179
chr19	CG	SV	34868629	35397720	23	.	.	ID=1055;Type=tandem-duplication;Left=chr19:34868629-34869318-;Right=chr19:35397356-35397720-;Distance=528402;DiscordantMatePairAlignments=23;LeftRepeat=L2:LINE:L2;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr19	CG	SV	34868629	34869318	23	-	.	ID=1055;Type=tandem-duplication;Left=chr19:34868629-34869318;Right=chr19:35397356-35397720
chr19	CG	SV	35397356	35397720	23	-	.	ID=1055;Type=tandem-duplication;Left=chr19:34868629-34869318;Right=chr19:35397356-35397720
chr20	CG	SV	9115210	9237389	113	.	.	ID=2459;Type=deletion;Left=chr20:9115210-9115752+;Right=chr20:9236871-9237389+;Distance=121661;DiscordantMatePairAlignments=113;LeftRepeat=;RightRepeat=;LeftGenes=NM_000933:+;NM_182797:+;RightGenes=NM_000933:+;NM_182797:+;XRef=;Frequency=0.00
chr20	CG	SV	9115210	9115752	113	+	.	ID=2459;Type=deletion;Left=chr20:9115210-9115752;Right=chr20:9236871-9237389
chr20	CG	SV	9236871	9237389	113	+	.	ID=2459;Type=deletion;Left=chr20:9115210-9115752;Right=chr20:9236871-9237389
chr20	CG	SV	14651687	14908891	67	.	.	ID=2455;Type=deletion;Left=chr20:14651687-14652228+;Right=chr20:14908280-14908891+;Distance=256593;DiscordantMatePairAlignments=67;LeftRepeat=;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	14651687	14652228	67	+	.	ID=2455;Type=deletion;Left=chr20:14651687-14652228;Right=chr20:14908280-14908891
chr20	CG	SV	14908280	14908891	67	+	.	ID=2455;Type=deletion;Left=chr20:14651687-14652228;Right=chr20:14908280-14908891
chr20	CG	SV	14696547	14848496	14	.	.	ID=2453;Type=deletion;Left=chr20:14696547-14697039+;Right=chr20:14848129-14848496+;Distance=151582;DiscordantMatePairAlignments=14;LeftRepeat=L1PA7:LINE:L1;Self chain;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	14696547	14697039	14	+	.	ID=2453;Type=deletion;Left=chr20:14696547-14697039;Right=chr20:14848129-14848496
chr20	CG	SV	14848129	14848496	14	+	.	ID=2453;Type=deletion;Left=chr20:14696547-14697039;Right=chr20:14848129-14848496
chr20	CG	SV	14714542	14722346	90	.	.	ID=2454;Type=deletion;Left=chr20:14714542-14715144+;Right=chr20:14721636-14722346+;Distance=7094;DiscordantMatePairAlignments=90;LeftRepeat=MLT1J:LTR:MaLR;RightRepeat=L2:LINE:L2;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	14714542	14715144	90	+	.	ID=2454;Type=deletion;Left=chr20:14714542-14715144;Right=chr20:14721636-14722346
chr20	CG	SV	14721636	14722346	90	+	.	ID=2454;Type=deletion;Left=chr20:14714542-14715144;Right=chr20:14721636-14722346
chr20	CG	SV	15007016	15071077	71	.	.	ID=2451;Type=deletion;Left=chr20:15007016-15007501+;Right=chr20:15070396-15071077+;Distance=63380;DiscordantMatePairAlignments=71;LeftRepeat=;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	15007016	15007501	71	+	.	ID=2451;Type=deletion;Left=chr20:15007016-15007501;Right=chr20:15070396-15071077
chr20	CG	SV	15070396	15071077	71	+	.	ID=2451;Type=deletion;Left=chr20:15007016-15007501;Right=chr20:15070396-15071077
chr20	CG	SV	15247611	15302168	46	.	.	ID=2448;Type=deletion;Left=chr20:15247611-15248199+;Right=chr20:15301668-15302168+;Distance=54057;DiscordantMatePairAlignments=46;LeftRepeat=L1MB5:LINE:L1;RightRepeat=AluJo:SINE:Alu;LeftGenes=NM_001033087:+;NM_080676:+;RightGenes=NM_001033087:+;NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	15247611	15248199	46	+	.	ID=2448;Type=deletion;Left=chr20:15247611-15248199;Right=chr20:15301668-15302168
chr20	CG	SV	15301668	15302168	46	+	.	ID=2448;Type=deletion;Left=chr20:15247611-15248199;Right=chr20:15301668-15302168
chr20	CG	SV	15735950	15883876	70	.	.	ID=2446;Type=deletion;Left=chr20:15735950-15736496+;Right=chr20:15883357-15883876+;Distance=147407;DiscordantMatePairAlignments=70;LeftRepeat=;RightRepeat=L2:LINE:L2;LeftGenes=NM_001033087:+;NM_080676:+;RightGenes=NM_001033087:+;NM_080676:+;XRef=;Frequency=0.00
chr20	CG	SV	15735950	15736496	70	+	.	ID=2446;Type=deletion;Left=chr20:15735950-15736496;Right=chr20:15883357-15883876
chr20	CG	SV	15883357	15883876	70	+	.	ID=2446;Type=deletion;Left=chr20:15735950-15736496;Right=chr20:15883357-15883876
chr21	CG	SV	24821509	24857396	31	.	.	ID=2352;Type=deletion;Left=chr21:24821509-24822116+;Right=chr21:24857083-24857396+;Distance=35574;DiscordantMatePairAlignments=31;LeftRepeat=AluY:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chr21	CG	SV	24821509	24822116	31	+	.	ID=2352;Type=deletion;Left=chr21:24821509-24822116;Right=chr21:24857083-24857396
chr21	CG	SV	24857083	24857396	31	+	.	ID=2352;Type=deletion;Left=chr21:24821509-24822116;Right=chr21:24857083-24857396
chr22	CG	SV	48809296	48810445	27	.	.	ID=2280;Type=deletion;Left=chr22:48809296-48809894+;Right=chr22:48809992-48810445+;Distance=696;DiscordantMatePairAlignments=27;LeftRepeat=Self chain;Tandem period 22;Tandem period 43;RightRepeat=Self chain;Tandem period 22;Tandem period 43;LeftGenes=NM_001080447:-;RightGenes=NM_001080447:-;XRef=;Frequency=0.06
chr22	CG	SV	48809296	48809894	27	+	.	ID=2280;Type=deletion;Left=chr22:48809296-48809894;Right=chr22:48809992-48810445
chr22	CG	SV	48809992	48810445	27	+	.	ID=2280;Type=deletion;Left=chr22:48809296-48809894;Right=chr22:48809992-48810445
chrX	CG	SV	1411270	1413917	14	.	.	ID=2273;Type=deletion;Left=chrX:1411270-1411464+;Right=chrX:1413443-1413917+;Distance=2173;DiscordantMatePairAlignments=14;LeftRepeat=L1PA7:LINE:L1;SegDup;Self chain;RightRepeat=AluSg/x:SINE:Alu;SegDup;Self chain;Tandem A;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	1411270	1411464	14	+	.	ID=2273;Type=deletion;Left=chrX:1411270-1411464;Right=chrX:1413443-1413917
chrX	CG	SV	1413443	1413917	14	+	.	ID=2273;Type=deletion;Left=chrX:1411270-1411464;Right=chrX:1413443-1413917
chrX	CG	SV	7019265	7109258	103	.	.	ID=2264;Type=deletion;Left=chrX:7019265-7019778+;Right=chrX:7108602-7109258+;Distance=89337;DiscordantMatePairAlignments=103;LeftRepeat=Self chain;RightRepeat=MER1A:DNA:MER1_type;Self chain;LeftGenes=NM_001135565:-;NM_012080:-;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	7019265	7019778	103	+	.	ID=2264;Type=deletion;Left=chrX:7019265-7019778;Right=chrX:7108602-7109258
chrX	CG	SV	7108602	7109258	103	+	.	ID=2264;Type=deletion;Left=chrX:7019265-7019778;Right=chrX:7108602-7109258
chrX	CG	SV	7226561	7274944	68	.	.	ID=2262;Type=deletion;Left=chrX:7226561-7227208+;Right=chrX:7274436-7274944+;Distance=47875;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_000351:+;RightGenes=NM_000351:+;XRef=;Frequency=0.00
chrX	CG	SV	7226561	7227208	68	+	.	ID=2262;Type=deletion;Left=chrX:7226561-7227208;Right=chrX:7274436-7274944
chrX	CG	SV	7274436	7274944	68	+	.	ID=2262;Type=deletion;Left=chrX:7226561-7227208;Right=chrX:7274436-7274944
chrX	CG	SV	26074161	40220013	80	.	.	ID=5131;Type=complex;Left=chrX:26074161-26074827+;Right=chrX:40219389-40220013-;Distance=14145852;DiscordantMatePairAlignments=80;LeftRepeat=Self chain;RightRepeat=LTR16A:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	26074161	26074827	80	+	.	ID=5131;Type=complex;Left=chrX:26074161-26074827;Right=chrX:40219389-40220013
chrX	CG	SV	40219389	40220013	80	+	.	ID=5131;Type=complex;Left=chrX:26074161-26074827;Right=chrX:40219389-40220013
chrX	CG	SV	26073591	40220662	87	.	.	ID=36;Type=complex;Left=chrX:26073591-26074169-;Right=chrX:40220026-40220662+;Distance=14145857;DiscordantMatePairAlignments=87;LeftRepeat=Self chain;RightRepeat=LTR16A:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	26073591	26074169	87	-	.	ID=36;Type=complex;Left=chrX:26073591-26074169;Right=chrX:40220026-40220662
chrX	CG	SV	40220026	40220662	87	-	.	ID=36;Type=complex;Left=chrX:26073591-26074169;Right=chrX:40220026-40220662
chrX	CG	SV	73415868	73516231	136	.	.	ID=975;Type=tandem-duplication;Left=chrX:73415868-73416421-;Right=chrX:73515703-73516231-;Distance=99810;DiscordantMatePairAlignments=136;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NR_028379:-;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	73415868	73416421	136	-	.	ID=975;Type=tandem-duplication;Left=chrX:73415868-73416421;Right=chrX:73515703-73516231
chrX	CG	SV	73515703	73516231	136	-	.	ID=975;Type=tandem-duplication;Left=chrX:73415868-73416421;Right=chrX:73515703-73516231
chrX	CG	SV	96576197	96699762	56	.	.	ID=2211;Type=deletion;Left=chrX:96576197-96576775+;Right=chrX:96699308-96699762+;Distance=123111;DiscordantMatePairAlignments=56;LeftRepeat=AluSc:SINE:Alu;RightRepeat=;LeftGenes=NM_006729:+;NM_007309:+;RightGenes=NM_006729:+;XRef=;Frequency=0.00
chrX	CG	SV	96576197	96576775	56	+	.	ID=2211;Type=deletion;Left=chrX:96576197-96576775;Right=chrX:96699308-96699762
chrX	CG	SV	96699308	96699762	56	+	.	ID=2211;Type=deletion;Left=chrX:96576197-96576775;Right=chrX:96699308-96699762
chrX	CG	SV	117905654	117908520	101	.	.	ID=2205;Type=deletion;Left=chrX:117905654-117906320+;Right=chrX:117907917-117908520+;Distance=2263;DiscordantMatePairAlignments=101;LeftRepeat=HERVP71A:LTR:ERV1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	117905654	117906320	101	+	.	ID=2205;Type=deletion;Left=chrX:117905654-117906320;Right=chrX:117907917-117908520
chrX	CG	SV	117907917	117908520	101	+	.	ID=2205;Type=deletion;Left=chrX:117905654-117906320;Right=chrX:117907917-117908520
chrX	CG	SV	122896658	122898095	14	.	.	ID=2201;Type=deletion;Left=chrX:122896658-122896803+;Right=chrX:122897659-122898095+;Distance=1001;DiscordantMatePairAlignments=14;LeftRepeat=CT-rich:Low_complexity:Low_complexity;RightRepeat=AluSg:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00
chrX	CG	SV	122896658	122896803	14	+	.	ID=2201;Type=deletion;Left=chrX:122896658-122896803;Right=chrX:122897659-122898095
chrX	CG	SV	122897659	122898095	14	+	.	ID=2201;Type=deletion;Left=chrX:122896658-122896803;Right=chrX:122897659-122898095